RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 CHMLP26374 656 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 TRIM23P36406 574 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 RGS2P41220 211 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 FCGRTP55899 365 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 GMFBP60983 142 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 ARF3P61204 181 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 ERVK-21P61565 698 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 ARF1P84077 181 aaKnown RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 SGCGQ13326 291 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 CYLC2Q14093 348 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 DHX34Q14147 1143 aaKnown RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 MLECQ14165 292 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 MORF4L2Q15014 288 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 PTPAQ15257 358 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 TRADDQ15628 312 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 MAPKAPK3Q16644 382 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 XKR3Q5GH77 459 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 YOD1Q5VVQ6 348 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 DENND5AQ6IQ26 1287 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 PGBD2Q6P3X8 592 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 IYDQ6PHW0 289 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 TTC6Q86TZ1 520 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 CTAGE6Q86UF2 777 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 CREG2Q8IUH2 290 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 DENND6AQ8IWF6 608 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 CTAGE4Q8IX94 777 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 TRMT2AQ8IZ69 625 aaKnown RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 C10orf53Q8N6V4 93 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 TSPYL6Q8N831 410 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 ANKS4BQ8N8V4 417 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 C19orf47Q8N9M1 422 aaKnown RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 CCDC150Q8NCX0 1101 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 SMC1BQ8NDV3 1235 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 FAM81AQ8TBF8 368 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 CAGE1Q8TC20 777 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 BCAS4Q8TDM0 211 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 ADAMTS15Q8TE58 950 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 FAM149B1Q96BN6 582 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 MIEF2Q96C03 454 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 INTS12Q96CB8 462 aaKnown RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 HSPBAP1Q96EW2 488 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 WDR89Q96FK6 387 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 THOC1Q96FV9 657 aaKnown RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 MSANTD3Q96H12 275 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 TAAR9Q96RI9 348 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 TSG101Q99816 390 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 SPXQ9BT56 116 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 STN1Q9H668 368 aaKnown RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 TRIM39Q9HCM9 518 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 VTA1Q9NP79 307 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 A1CFQ9NQ94 594 aaKnown RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 PRDM7Q9NQW5 492 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 PICK1Q9NRD5 415 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 SERINC1Q9NRX5 453 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 GDAP2Q9NXN4 497 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 SLC39A1Q9NY26 324 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 TAS2R3Q9NYW6 316 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 LMCD1Q9NZU5 365 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 USP36Q9P275 1121 aaKnown RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 KIF17Q9P2E2 1029 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 AASSQ9UDR5 926 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 MALT1Q9UDY8 824 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 SRP68Q9UHB9 627 aaKnown RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 GPN3Q9UHW5 284 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 EIF2B4Q9UI10 523 aaKnown RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 RCOR1Q9UKL0 485 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 PLAGL2Q9UPG8 496 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 TNPO3Q9Y5L0 923 aaKnown RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 NSD2O96028 1365 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 TRBV23-1A0A0A0MS06 115 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 ARHGAP10A1A4S6 786 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 MAGEB16A2A368 324 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 ZNF503-AS2A6NEH8 195 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 A6NLC8 198 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 B8ZZF3 427 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 E7EVH7 732 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 O00370 1275 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 SMAD6O43541 496 aaKnown RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 BUB1O43683 1085 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 SUSD5O60279 629 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 ULK1O75385 1050 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 PPM1BO75688 479 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 ALDH1A2O94788 518 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 RTN3O95197 1032 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 SLU7O95391 586 aaKnown RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 SGPL1O95470 568 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 ASGR1P07306 291 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 GLI1P08151 1106 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 TMIGD3P0DMS9 266 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 ALAS1P13196 640 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 PRLRP16471 622 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 ENDOUP21128 410 aaKnown RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 CDH3P22223 829 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 PRKACBP22694 351 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 ACAT1P24752 427 aaKnown RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 HAAOP46952 286 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 HNMTP50135 292 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 ARFIP1P53367 373 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 YARSP54577 528 aaKnown RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 PLTPP55058 493 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms