RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 DZIP1Q86YF9 867 aaKnown RBP5.87□□□□□ -1.47
SCAF11-214ENST00000550893 RPAP2Q8IXW5 612 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-214ENST00000550893 ZZZ3Q8IYH5 903 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 SCYL3Q8IZE3 742 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 AHI1Q8N157 1196 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 PPM1KQ8N3J5 372 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 LCORLQ8N3X6 602 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 MIGA1Q8NAN2 632 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 CD99L2Q8TCZ2 262 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 LPPQ93052 612 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 SLC7A6OSQ96CW6 309 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-214ENST00000550893 MFSD3Q96ES6 412 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 DYDC2Q96IM9 177 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 ZNF341Q9BYN7 854 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 HAPLN2Q9GZV7 340 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 TMPRSS5Q9H3S3 457 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 POLR3BQ9NW08 1133 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-214ENST00000550893 DNAI1Q9UI46 699 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 ROBO3Q96MS0 1386 aa5.87□□□□□ -1.47
SCAF11-214ENST00000550893 CHD9Q3L8U1 2897 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 ZNF532Q9HCE3 1301 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 CYP2D7A0A087X1C5 515 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 ENPP3O14638 875 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 PRKAB2O43741 272 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 FRAT2O75474 233 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-214ENST00000550893 CD40P25942 277 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 NF2P35240 595 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 ADD2P35612 726 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 PLCD1P51178 756 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 KPNA1P52294 538 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-214ENST00000550893 PPATQ06203 517 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 SREBF2Q12772 1141 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 RIN1Q13671 783 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 LRRC32Q14392 662 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 SLC4A8Q2Y0W8 1093 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 TTC39AQ5SRH9 613 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 KIAA1841Q6NSI8 718 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 NOP9Q86U38 636 aaKnown RBP5.86□□□□□ -1.47
SCAF11-214ENST00000550893 PASD1Q8IV76 773 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 MAPKAPK5Q8IW41 473 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 ZNF808Q8N4W9 903 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-214ENST00000550893 ZGPATQ8N5A5 531 aaKnown RBP5.86□□□□□ -1.47
SCAF11-214ENST00000550893 MAGEB6Q8N7X4 407 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 SLC44A5Q8NCS7 719 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 RABGGTAQ92696 567 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 GCDHQ92947 438 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-214ENST00000550893 KIF1BPQ96EK5 621 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 TMEM176AQ96HP8 235 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 WDR92Q96MX6 357 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 KRTAP9-8Q9BYQ0 159 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 PITHD1Q9GZP4 211 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-214ENST00000550893 SLC6A15Q9H2J7 730 aa5.86□□□□□ -1.47
SCAF11-214ENST00000550893 GNL3LQ9NVN8 582 aaKnown RBP5.86□□□□□ -1.47
SCAF11-214ENST00000550893 TRIOBPQ9H2D6 2365 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 PRUNE2Q8WUY3 3088 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 A0A0A6YYJ9 748 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 GOLIM4O00461 696 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 TLR2O60603 784 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 CNMDO75829 334 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 AMHP03971 560 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 HNRNPLP14866 589 aaKnown RBP eCLIP5.85□□□□□ -1.47
SCAF11-214ENST00000550893 ATP5JP18859 108 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 SCNN1BP51168 640 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 SOX10P56693 466 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 ADAM8P78325 824 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 SART3Q15020 963 aaKnown RBP5.85□□□□□ -1.47
SCAF11-214ENST00000550893 NAA16Q6N069 864 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-214ENST00000550893 TATDN1Q6P1N9 297 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 ANKRD23Q86SG2 305 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 TEX11Q8IYF3 940 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 ANKRD53Q8N9V6 530 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 TGFBRAP1Q8WUH2 860 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 SDR42E1Q8WUS8 393 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 RPL10LQ96L21 214 aaKnown RBP5.85□□□□□ -1.47
SCAF11-214ENST00000550893 ZNF747Q9BV97 191 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 PUS7LQ9H0K6 701 aaKnown RBP5.85□□□□□ -1.47
SCAF11-214ENST00000550893 IL25Q9H293 177 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 MTG2Q9H4K7 406 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.85□□□□□ -1.47
SCAF11-214ENST00000550893 TXNRD2Q9NNW7 524 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 ZCCHC17Q9NP64 241 aaKnown RBP5.85□□□□□ -1.47
SCAF11-214ENST00000550893 SPTLC3Q9NUV7 552 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 RAI14Q9P0K7 980 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 SAP30BPQ9UHR5 308 aaKnown RBP5.85□□□□□ -1.47
SCAF11-214ENST00000550893 ZBTB21Q9ULJ3 1066 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 HDAC5Q9UQL6 1122 aa5.85□□□□□ -1.47
SCAF11-214ENST00000550893 CHD7Q9P2D1 2997 aa5.84□□□□□ -1.47
SCAF11-214ENST00000550893 A0A087X0B3 334 aa5.84□□□□□ -1.47
SCAF11-214ENST00000550893 A0A1W2PRG0 241 aa5.84□□□□□ -1.47
SCAF11-214ENST00000550893 A0A1W2PRX2 142 aa5.84□□□□□ -1.47
SCAF11-214ENST00000550893 LCHNA4D1U4 455 aa5.84□□□□□ -1.47
SCAF11-214ENST00000550893 GSG1L2A8MUP6 293 aa5.84□□□□□ -1.47
SCAF11-214ENST00000550893 OPHN1O60890 802 aa5.84□□□□□ -1.47
SCAF11-214ENST00000550893 IDH1O75874 414 aaKnown RBP5.84□□□□□ -1.47
SCAF11-214ENST00000550893 MAP4K4O95819 1239 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-214ENST00000550893 IGHDP01880 384 aa5.84□□□□□ -1.47
SCAF11-214ENST00000550893 BPIFB4P59827 614 aa5.84□□□□□ -1.47
SCAF11-214ENST00000550893 USP39Q53GS9 565 aaKnown RBP5.84□□□□□ -1.47
SCAF11-214ENST00000550893 SPTY2D1Q68D10 685 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-214ENST00000550893 FBXO46Q6PJ61 603 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms