RNA–Protein interactions for RNA: ENST00000545279.5

SMAD5-211, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD5, Length 7,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-211ENST00000545279 SNX2O60749 519 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 KRT3P12035 628 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 SDHBP21912 280 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 ICAM3P32942 547 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 MXRA7P84157 204 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 GAD2Q05329 585 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 FYB2Q5VWT5 728 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 C8orf74Q6P047 294 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 IFT81Q8WYA0 676 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 SLC5A5Q92911 643 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 TOX2Q96NM4 488 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 RNPEPQ9H4A4 650 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 KRT82Q9NSB4 513 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 GIMAP4Q9NUV9 329 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 WBP1LQ9NX94 342 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 IMPACTQ9P2X3 320 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 CNOT8Q9UFF9 292 aaKnown RBP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 BARX2Q9UMQ3 279 aaPredicted RBP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 USP20Q9Y2K6 914 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 PCDHA5Q9Y5H7 936 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 H3BM21 787 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 TTI1O43156 1089 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 DARSP14868 501 aaKnown RBP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 PDGFRAP16234 1089 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 ITGALP20701 1170 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 DDX6P26196 483 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 SLC39A12Q504Y0 691 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 MTERF4Q7Z6M4 381 aaKnown RBP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 CATSPER3Q86XQ3 398 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 NKX2-4Q9H2Z4 354 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 TLR9Q9NR96 1032 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 RCOR1Q9UKL0 485 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 V9GYY5 206 aaPredicted RBP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 HNRNPA1P09651 372 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 SMPD1P17405 629 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 NMT1P30419 496 aaKnown RBP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 RWDD2BP57060 319 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 MESDQ14696 234 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 ZFPM1Q8IX07 1006 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 TTC30BQ8N4P2 665 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 LZTR1Q8N653 840 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 SCYL1Q96KG9 808 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 SENP2Q9HC62 589 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 FAM49BQ9NUQ9 324 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 CD207Q9UJ71 328 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 KAT6BQ8WYB5 2073 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 FAM47E-STBD1D6RA91 191 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 RBAK-RBAKDNI3L0D1 243 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 GFPT2O94808 682 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 HLA-DRAP01903 254 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 NCAM1P13591 858 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 TYMPP19971 482 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 GTF2F1P35269 517 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 GRM3Q14832 879 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 E4F1Q66K89 784 aaPredicted RBP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 CMTR2Q8IYT2 770 aaKnown RBP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 KIRREL3Q8IZU9 778 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 HLA-CQ95604 372 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 FANCEQ9HB96 536 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 CDH9Q9ULB4 789 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 PADI3Q9ULW8 664 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 NDRG2Q9UN36 371 aaKnown RBP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 FAM47DPA6NHR8 397 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 SRGAP2O75044 1071 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 ERVK-10P10266 1014 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 ZBED6P86452 979 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 GOLGA7BQ2TAP0 167 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 PHACTR4Q8IZ21 702 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 AVL9Q8NBF6 648 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 COPS5Q92905 334 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 BADQ92934 168 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 TRMT61BQ9BVS5 477 aaKnown RBP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 RBSNQ9H1K0 784 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 RTN4Q9NQC3 1192 aaKnown RBP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 FAM105AQ9NUU6 356 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 SNTG2Q9NY99 539 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.88□□□□□ -1.31
SMAD5-211ENST00000545279 STARD13Q9Y3M8 1113 aa6.88□□□□□ -1.31
SMAD5-211ENST00000545279 RPN2P04844 631 aa6.87□□□□□ -1.31
SMAD5-211ENST00000545279 HPDP32754 393 aaPredicted RBP6.87□□□□□ -1.31
SMAD5-211ENST00000545279 MNAT1P51948 309 aa6.87□□□□□ -1.31
SMAD5-211ENST00000545279 FBXW4P57775 412 aa6.87□□□□□ -1.31
SMAD5-211ENST00000545279 TWF1Q12792 350 aa6.87□□□□□ -1.31
SMAD5-211ENST00000545279 USP39Q53GS9 565 aaKnown RBP6.87□□□□□ -1.31
SMAD5-211ENST00000545279 BOLA3Q53S33 107 aa6.87□□□□□ -1.31
SMAD5-211ENST00000545279 TAF1BQ53T94 588 aaPredicted RBP6.87□□□□□ -1.31
SMAD5-211ENST00000545279 FAM173BQ6P4H8 233 aa6.87□□□□□ -1.31
SMAD5-211ENST00000545279 FBXL19Q6PCT2 694 aa6.87□□□□□ -1.31
SMAD5-211ENST00000545279 PRPF39Q86UA1 669 aaKnown RBP6.87□□□□□ -1.31
SMAD5-211ENST00000545279 PHC3Q8NDX5 983 aa6.87□□□□□ -1.31
SMAD5-211ENST00000545279 IGDCC4Q8TDY8 1250 aa6.87□□□□□ -1.31
SMAD5-211ENST00000545279 WFIKKN2Q8TEU8 576 aa6.87□□□□□ -1.31
SMAD5-211ENST00000545279 TSC1Q92574 1164 aa6.87□□□□□ -1.31
SMAD5-211ENST00000545279 HPS3Q969F9 1004 aa6.87□□□□□ -1.31
SMAD5-211ENST00000545279 NAPGQ99747 312 aaPredicted RBP6.87□□□□□ -1.31
SMAD5-211ENST00000545279 CRLS1Q9UJA2 301 aa6.87□□□□□ -1.31
SMAD5-211ENST00000545279 DERAQ9Y315 318 aa6.87□□□□□ -1.31
SMAD5-211ENST00000545279 CLIC4Q9Y696 253 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms