RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 C2orf15Q8WU43 125 aaKnown RBP10.47□□□□□ -0.73
TNFRSF1A-214ENST00000543048 TMEM174Q8WUU8 243 aa10.47□□□□□ -0.73
TNFRSF1A-214ENST00000543048 FNBP1Q96RU3 617 aa10.47□□□□□ -0.73
TNFRSF1A-214ENST00000543048 TMEM209Q96SK2 561 aa10.47□□□□□ -0.73
TNFRSF1A-214ENST00000543048 RTP3Q9BQQ7 232 aa10.47□□□□□ -0.73
TNFRSF1A-214ENST00000543048 MTMR12Q9C0I1 747 aa10.47□□□□□ -0.73
TNFRSF1A-214ENST00000543048 KCNH6Q9H252 994 aa10.47□□□□□ -0.73
TNFRSF1A-214ENST00000543048 GOLPH3LQ9H4A5 285 aa10.47□□□□□ -0.73
TNFRSF1A-214ENST00000543048 DMAC2Q9NW81 257 aa10.47□□□□□ -0.73
TNFRSF1A-214ENST00000543048 GDE1Q9NZC3 331 aa10.47□□□□□ -0.73
TNFRSF1A-214ENST00000543048 CEP72Q9P209 647 aa10.47□□□□□ -0.73
TNFRSF1A-214ENST00000543048 SIX4Q9UIU6 781 aa10.47□□□□□ -0.73
TNFRSF1A-214ENST00000543048 DUSP12Q9UNI6 340 aa10.47□□□□□ -0.73
TNFRSF1A-214ENST00000543048 ASB3Q9Y575 518 aa10.47□□□□□ -0.73
TNFRSF1A-214ENST00000543048 MUC6Q6W4X9 2439 aa10.47□□□□□ -0.73
TNFRSF1A-214ENST00000543048 KMT2EQ8IZD2 1858 aa10.47□□□□□ -0.73
TNFRSF1A-214ENST00000543048 GREB1Q4ZG55 1949 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 MTMR11A4FU01 709 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 PDXKO00764 312 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 RHOBTB3O94955 611 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 DLATP10515 647 aaKnown RBP10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 LHX1P48742 406 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 MYL7Q01449 175 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 DPYDQ12882 1025 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 SLC39A12Q504Y0 691 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 PRSS36Q5K4E3 855 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 SCARA3Q6AZY7 606 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 PARM1Q6UWI2 310 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 MTSS1LQ765P7 747 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 PDZD4Q76G19 769 aaPredicted RBP10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 DPH6Q7L8W6 267 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 LRRTM3Q86VH5 581 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 SLC9A9Q8IVB4 645 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 NPAS3Q8IXF0 933 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 PDCL2Q8N4E4 241 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 TOP6BLQ8N6T0 577 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 LEMD2Q8NC56 503 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 SPATA18Q8TC71 538 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 ING5Q8WYH8 240 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 CCDC127Q96BQ5 260 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 MCRS1Q96EZ8 462 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 HPDLQ96IR7 371 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 FAM84AQ96KN4 292 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 ACBD6Q9BR61 282 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 KCTD10Q9H3F6 313 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 WNT16Q9UBV4 365 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 FBXL21Q9UKT6 434 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 SNX9Q9Y5X1 595 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 NUMBLQ9Y6R0 609 aa10.46□□□□□ -0.73
TNFRSF1A-214ENST00000543048 PTPRDP23468 1912 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PTPRJQ12913 1337 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 NARSO43776 548 aaKnown RBP10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CALUO43852 315 aaPredicted RBP10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CST3P01034 146 aaPredicted RBP10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 FAM163BP0C2L3 166 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SRFP11831 508 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MYL4P12829 197 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 AVPR2P30518 371 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 EPHA5P54756 1037 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TSPY1Q01534 308 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 KCNB1Q14721 858 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 NFE2Q16621 373 aaPredicted RBP10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SLC5A9Q2M3M2 681 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 DNAJB7Q7Z6W7 309 aaPredicted RBP10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ITIH5Q86UX2 942 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 FMR1NBQ8N0W7 255 aaPredicted RBP10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ST13P5Q8NFI4 369 aaPredicted RBP10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SPPL2BQ8TCT7 592 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ZNF516Q92618 1163 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 FGF14Q92915 247 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TCEAL4Q96EI5 215 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CGRRF1Q99675 332 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 RPP25Q9BUL9 199 aaKnown RBP10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 GPR88Q9GZN0 384 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CRISPLD1Q9H336 500 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MFSD1Q9H3U5 465 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ASAH2Q9NR71 780 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 DDX43Q9NXZ2 648 aaKnown RBP10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CHMP5Q9NZZ3 219 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 L1RE1Q9UN81 338 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 YIPF1Q9Y548 306 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 WDFY4Q6ZS81 3184 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MIA3Q5JRA6 1907 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ANAPC1Q9H1A4 1944 aa10.45□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ARHGAP33O14559 1287 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 GABRDO14764 452 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PHACTR2O75167 634 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MOSPD3O75425 235 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ECI2O75521 394 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PDGFBP01127 241 aaPredicted RBP10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 NR3C1P04150 777 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 HAPLN1P10915 354 aaPredicted RBP10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CEBPBP17676 345 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CCR2P41597 374 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CLCN5P51795 746 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 AP3M2P53677 418 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TRPC3Q13507 836 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SNW1Q13573 536 aaKnown RBP10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SOWAHAQ2M3V2 549 aa10.44□□□□□ -0.74
TNFRSF1A-214ENST00000543048 LIMS2Q7Z4I7 341 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms