RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ATXN2LQ8WWM7 1075 aaKnown RBP15.62■□□□□ 0.09
DDX55-209ENST00000542286 STAMBPL1Q96FJ0 436 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 CPB2Q96IY4 423 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 TWNKQ96RR1 684 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 IMPG2Q9BZV3 1241 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 ABLIM1O14639 778 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 TOM1L1O75674 476 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 HOXC6P09630 235 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 MMP8P22894 467 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 EDNRBP24530 442 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 BPIFB4P59827 614 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 GRIK3Q13003 919 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 TRPC3Q13507 836 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 P3H1Q32P28 736 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 NOL9Q5SY16 702 aaKnown RBP15.61■□□□□ 0.09
DDX55-209ENST00000542286 RHBDF2Q6PJF5 856 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 ARMC9Q7Z3E5 817 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 GPC2Q8N158 579 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 GDAP1Q8TB36 358 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 P3H4Q92791 437 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 SNF8Q96H20 258 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 MRPL4Q9BYD3 311 aaKnown RBP15.61■□□□□ 0.09
DDX55-209ENST00000542286 CXCL16Q9H2A7 254 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 RBPJLQ9UBG7 517 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.61■□□□□ 0.09
DDX55-209ENST00000542286 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.61■□□□□ 0.09
DDX55-209ENST00000542286 IFNB1P01574 187 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 NFICP08651 508 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 DRD4P21917 467 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 MYO1EQ12965 1108 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 MPP2Q14168 576 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 TAF5Q15542 800 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 MAPK6Q16659 721 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 ZNF699Q32M78 642 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 ERMARDQ5T6L9 678 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 IZUMO3Q5VZ72 239 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.61■□□□□ 0.09
DDX55-209ENST00000542286 NINJ2Q9NZG7 142 aa15.61■□□□□ 0.09
DDX55-209ENST00000542286 LRRD1A4D1F6 860 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 LDHAP00338 332 aaKnown RBP15.6■□□□□ 0.09
DDX55-209ENST00000542286 TMEM191BP0C7N4 346 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 GHRP10912 638 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 GCKP35557 465 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 MMP13P45452 471 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 NFX1Q12986 1120 aaKnown RBP15.6■□□□□ 0.09
DDX55-209ENST00000542286 WDR72Q3MJ13 1102 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 FAM160B1Q5W0V3 765 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 ZNF677Q86XU0 584 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 PHF13Q86YI8 300 aaPredicted RBP15.6■□□□□ 0.09
DDX55-209ENST00000542286 SULF1Q8IWU6 871 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 KIAA0319LQ8IZA0 1049 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 LRRN4Q8WUT4 740 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 CD48P09326 243 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 RFC1P35251 1148 aaPredicted RBP15.6■□□□□ 0.09
DDX55-209ENST00000542286 ASPAP45381 313 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 ZNF132P52740 706 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 BIRC2Q13490 618 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 EFCAB12Q6NXP0 572 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 DNAJC24Q6P3W2 148 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 ZNF365Q70YC5 407 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 DHX37Q8IY37 1157 aaKnown RBP15.6■□□□□ 0.09
DDX55-209ENST00000542286 ARMC2Q8NEN0 867 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 ATL2Q8NHH9 583 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 TCP11Q8WWU5 503 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 SPDL1Q96EA4 605 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 PGM2Q96G03 612 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 TMEM121Q9BTD3 319 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 SDCBP2Q9H190 292 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 SMYD3Q9H7B4 428 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 KCNK9Q9NPC2 374 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 INTS9Q9NV88 658 aaKnown RBP15.6■□□□□ 0.09
DDX55-209ENST00000542286 PCSK1NQ9UHG2 260 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 CPSF3Q9UKF6 684 aaKnown RBP15.6■□□□□ 0.09
DDX55-209ENST00000542286 ZNF148Q9UQR1 794 aa15.6■□□□□ 0.09
DDX55-209ENST00000542286 TMEM191CA6NGB0 347 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 GPR25O00155 361 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 VTNP04004 478 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 VIMP08670 466 aaKnown RBP15.59■□□□□ 0.09
DDX55-209ENST00000542286 PAEPP09466 180 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 MYBL1P10243 752 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 TXNP10599 105 aaKnown RBP15.59■□□□□ 0.09
DDX55-209ENST00000542286 RFC5P40937 340 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 SARNPP82979 210 aaKnown RBP15.59■□□□□ 0.09
DDX55-209ENST00000542286 PLCB3Q01970 1234 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 PTK6Q13882 451 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 SLMAPQ14BN4 828 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 CLUL1Q15846 466 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 PTPN20Q4JDL3 420 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 ARHGEF2Q92974 986 aaKnown RBP15.59■□□□□ 0.09
DDX55-209ENST00000542286 PLVAPQ9BX97 442 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 FAM129AQ9BZQ8 928 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 XYLT2Q9H1B5 865 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 EBF2Q9HAK2 575 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 PARVAQ9NVD7 372 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 PARP2Q9UGN5 583 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 LTBP3Q9NS15 1303 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 CCT8L1PA6NM43 557 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 OGTO15294 1046 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 GAS8O95995 478 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 ZNF286BP0CG31 522 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms