RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 TCP11X1B4DZS4 312 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 HGSO14964 777 aaPredicted RBP12.18□□□□□ -0.46
C11orf54-214ENST00000540113 TOM1L1O75674 476 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 SLC25A27O95847 323 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 KLRC2P26717 231 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 KCNT1Q5JUK3 1230 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 IER5Q5VY09 327 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 EEF1DP3Q658K8 133 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 DENND1BQ6P3S1 775 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 DNAJC24Q6P3W2 148 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 TRIM72Q6ZMU5 477 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 USP50Q70EL3 339 aaPredicted RBP12.18□□□□□ -0.46
C11orf54-214ENST00000540113 SRRM1Q8IYB3 904 aaKnown RBP12.18□□□□□ -0.46
C11orf54-214ENST00000540113 ANKRD13AQ8IZ07 590 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 CCDC197Q8NCU1 140 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 EXD1Q8NHP7 514 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 CCT6BQ92526 530 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 MRPL4Q9BYD3 311 aaKnown RBP12.18□□□□□ -0.46
C11orf54-214ENST00000540113 ZWILCHQ9H900 591 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 IP6K2Q9UHH9 426 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 GGA2Q9UJY4 613 aa12.18□□□□□ -0.46
C11orf54-214ENST00000540113 LRRD1A4D1F6 860 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 GOLGA8MH3BSY2 632 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 LIASO43766 372 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 PIAS1O75925 651 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 CD19P15391 556 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 SCTRP47872 440 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 EFNA5P52803 228 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 PPIL2Q13356 520 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 TRPC3Q13507 836 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 ZKSCAN8Q15776 578 aaPredicted RBP12.17□□□□□ -0.46
C11orf54-214ENST00000540113 WDR78Q5VTH9 848 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 MFSD5Q6N075 450 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 CCDC62Q6P9F0 684 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 TAOK1Q7L7X3 1001 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 C3orf20Q8ND61 904 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 RBM15Q96T37 977 aaKnown RBP eCLIP12.17□□□□□ -0.46
C11orf54-214ENST00000540113 MMP19Q99542 508 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 TMEM121Q9BTD3 319 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 ROPN1BQ9BZX4 212 aaPredicted RBP12.17□□□□□ -0.46
C11orf54-214ENST00000540113 ROPN1Q9HAT0 212 aaPredicted RBP12.17□□□□□ -0.46
C11orf54-214ENST00000540113 SLC40A1Q9NP59 571 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 SAYSD1Q9NPB0 183 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 FGFR1OP2Q9NVK5 253 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 CYTH4Q9UIA0 394 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 NAALADL1Q9UQQ1 740 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 INO80B-WBP1J3KQ70 363 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 IFNB1P01574 187 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 BRAFP15056 766 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 ARSEP51690 589 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 CLCN3P51790 818 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 IGBP1P78318 339 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 PLCB3Q01970 1234 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 GAD2Q05329 585 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 GPS1Q13098 491 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 FAM133BQ5BKY9 247 aaKnown RBP12.17□□□□□ -0.46
C11orf54-214ENST00000540113 SPOCD1Q6ZMY3 1216 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 PLPPR4Q7Z2D5 763 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 PIGWQ7Z7B1 504 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 WDR49Q8IV35 697 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 EMC1Q8N766 993 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 JOSD2Q8TAC2 188 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 ZC3H15Q8WU90 426 aaKnown RBP12.17□□□□□ -0.46
C11orf54-214ENST00000540113 OPTNQ96CV9 577 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 VCPIP1Q96JH7 1222 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 SERPINB12Q96P63 405 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 INO80BQ9C086 356 aaPredicted RBP12.17□□□□□ -0.46
C11orf54-214ENST00000540113 MINDY3Q9H8M7 445 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 PDGFCQ9NRA1 345 aa12.17□□□□□ -0.46
C11orf54-214ENST00000540113 CPSF3Q9UKF6 684 aaKnown RBP12.17□□□□□ -0.46
C11orf54-214ENST00000540113 PIK3R2O00459 728 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 NOP56O00567 594 aaKnown RBP12.16□□□□□ -0.46
C11orf54-214ENST00000540113 OGTO15294 1046 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 HOXC6P09630 235 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 MAN1A1P33908 653 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 GJA5P36382 358 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 MCL1Q07820 350 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 TMED2Q15363 201 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 GPR162Q16538 588 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 ZNF699Q32M78 642 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 GJC2Q5T442 439 aaPredicted RBP12.16□□□□□ -0.46
C11orf54-214ENST00000540113 HIBCHQ6NVY1 386 aaPredicted RBP12.16□□□□□ -0.46
C11orf54-214ENST00000540113 SYDE1Q6ZW31 735 aaPredicted RBP12.16□□□□□ -0.46
C11orf54-214ENST00000540113 DPH6Q7L8W6 267 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 ERICH1Q86X53 443 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 CCDC89Q8N998 374 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 SPATA33Q96N06 139 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 NIF3L1Q9GZT8 377 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 STMN4Q9H169 189 aaPredicted RBP12.16□□□□□ -0.46
C11orf54-214ENST00000540113 ABCF3Q9NUQ8 709 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 HMGXB4Q9UGU5 601 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 PPME1Q9Y570 386 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 EVPLQ92817 2033 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 TCRBV5S1A1TA0A578 114 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 CCT8L1PA6NM43 557 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 POC1B-GALNT4F8VUJ3 575 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 SPAG7O75391 227 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 IQCF3P0C7M6 154 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 CXCL8P10145 99 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 PROZP22891 400 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms