RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 COBLL1Q53SF7 1204 aa10.13□□□□□ -0.79
VPS26B-207ENST00000532160 VARS2Q5ST30 1063 aaKnown RBP10.13□□□□□ -0.79
VPS26B-207ENST00000532160 TANGO2Q6ICL3 276 aa10.13□□□□□ -0.79
VPS26B-207ENST00000532160 SLFN12LQ6IEE8 588 aa10.13□□□□□ -0.79
VPS26B-207ENST00000532160 CENPPQ6IPU0 288 aa10.13□□□□□ -0.79
VPS26B-207ENST00000532160 TPRG1Q6ZUI0 275 aa10.13□□□□□ -0.79
VPS26B-207ENST00000532160 ANKS3Q6ZW76 656 aa10.13□□□□□ -0.79
VPS26B-207ENST00000532160 HS2ST1Q7LGA3 356 aa10.13□□□□□ -0.79
VPS26B-207ENST00000532160 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.13□□□□□ -0.79
VPS26B-207ENST00000532160 CBWD2Q8IUF1 395 aa10.13□□□□□ -0.79
VPS26B-207ENST00000532160 TMEM130Q8N3G9 435 aa10.13□□□□□ -0.79
VPS26B-207ENST00000532160 C18orf25Q96B23 403 aaPredicted RBP10.13□□□□□ -0.79
VPS26B-207ENST00000532160 TCEAL4Q96EI5 215 aa10.13□□□□□ -0.79
VPS26B-207ENST00000532160 DHTKD1Q96HY7 919 aaPredicted RBP10.13□□□□□ -0.79
VPS26B-207ENST00000532160 FAM84AQ96KN4 292 aa10.13□□□□□ -0.79
VPS26B-207ENST00000532160 UROC1Q96N76 676 aa10.13□□□□□ -0.79
VPS26B-207ENST00000532160 DUSP9Q99956 384 aaKnown RBP10.13□□□□□ -0.79
VPS26B-207ENST00000532160 FAM213AQ9BRX8 229 aa10.13□□□□□ -0.79
VPS26B-207ENST00000532160 BCO2Q9BYV7 579 aa10.13□□□□□ -0.79
VPS26B-207ENST00000532160 SPATA6Q9NWH7 488 aaPredicted RBP10.13□□□□□ -0.79
VPS26B-207ENST00000532160 GDE1Q9NZC3 331 aa10.13□□□□□ -0.79
VPS26B-207ENST00000532160 MRPS23Q9Y3D9 190 aaKnown RBP10.13□□□□□ -0.79
VPS26B-207ENST00000532160 COL4A2P08572 1712 aa10.13□□□□□ -0.79
VPS26B-207ENST00000532160 TICRRQ7Z2Z1 1910 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 MED19A0JLT2 244 aaPredicted RBP10.12□□□□□ -0.79
VPS26B-207ENST00000532160 OGTO15294 1046 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 TRAPPC3O43617 180 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 RRP9O43818 475 aaKnown RBP10.12□□□□□ -0.79
VPS26B-207ENST00000532160 CALUO43852 315 aaPredicted RBP10.12□□□□□ -0.79
VPS26B-207ENST00000532160 TBC1D4O60343 1298 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 EXOC3O60645 756 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 ABLIM3O94929 683 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 SEC24AO95486 1093 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 ADRB2P07550 413 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 CXCL8P10145 99 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 FCARP24071 287 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 NR2F2P24468 414 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 CCR2P41597 374 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 YARSP54577 528 aaKnown RBP10.12□□□□□ -0.79
VPS26B-207ENST00000532160 ARPP19P56211 112 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 WNT7BP56706 349 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 PFKPQ01813 784 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 CSTF1Q05048 431 aaKnown RBP10.12□□□□□ -0.79
VPS26B-207ENST00000532160 ANO6Q4KMQ2 910 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 PRSS36Q5K4E3 855 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 CEP135Q66GS9 1140 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 SLC8B1Q6J4K2 584 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 TTI2Q6NXR4 508 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 CRELD2Q6UXH1 353 aaPredicted RBP10.12□□□□□ -0.79
VPS26B-207ENST00000532160 RTL10Q7L3V2 364 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 APBB1IPQ7Z5R6 666 aaPredicted RBP10.12□□□□□ -0.79
VPS26B-207ENST00000532160 GPD1LQ8N335 351 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 MLKLQ8NB16 471 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 SUMF1Q8NBK3 374 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 ZNF461Q8TAF7 563 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 RUBCNQ92622 972 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 TSG101Q99816 390 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 CORO1BQ9BR76 489 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 FUCA2Q9BTY2 467 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 CCDC94Q9BW85 323 aaPredicted RBP10.12□□□□□ -0.79
VPS26B-207ENST00000532160 AVENQ9NQS1 362 aaPredicted RBP10.12□□□□□ -0.79
VPS26B-207ENST00000532160 HEBP1Q9NRV9 189 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 TOPORSQ9NS56 1045 aaPredicted RBP10.12□□□□□ -0.79
VPS26B-207ENST00000532160 ANO10Q9NW15 660 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 CPSF3Q9UKF6 684 aaKnown RBP10.12□□□□□ -0.79
VPS26B-207ENST00000532160 TRAF3IP3Q9Y228 551 aa10.12□□□□□ -0.79
VPS26B-207ENST00000532160 PRRG1O14668 218 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 LAMTOR5O43504 91 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 ECI2O75521 394 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 LRG1P02750 347 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 ATF2P15336 505 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 KCNE1P15382 129 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 ADAM9Q13443 819 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 FZD5Q13467 585 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 MRPL58Q14197 206 aaKnown RBP10.11□□□□□ -0.79
VPS26B-207ENST00000532160 GRM2Q14416 872 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 ENOX2Q16206 610 aaKnown RBP10.11□□□□□ -0.79
VPS26B-207ENST00000532160 SLC10A6Q3KNW5 377 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 GLIPR1L2Q4G1C9 344 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 HSP90AA4PQ58FG1 418 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 LMBRD2Q68DH5 695 aaPredicted RBP10.11□□□□□ -0.79
VPS26B-207ENST00000532160 XXYLT1Q8NBI6 393 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 CLDN23Q96B33 292 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 MS4A3Q96HJ5 214 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 ACAP3Q96P50 834 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 GTPBP4Q9BZE4 634 aaKnown RBP10.11□□□□□ -0.79
VPS26B-207ENST00000532160 OSBPL6Q9BZF3 934 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 NAT10Q9H0A0 1025 aaKnown RBP10.11□□□□□ -0.79
VPS26B-207ENST00000532160 RPF1Q9H9Y2 349 aaKnown RBP10.11□□□□□ -0.79
VPS26B-207ENST00000532160 CYP4F11Q9HBI6 524 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 SLC38A7Q9NVC3 462 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 DMAC2Q9NW81 257 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 CNTN3Q9P232 1028 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 FBXL5Q9UKA1 691 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 FBXO4Q9UKT5 387 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 INSL5Q9Y5Q6 135 aa10.11□□□□□ -0.79
VPS26B-207ENST00000532160 NCANO14594 1321 aa10.1□□□□□ -0.79
VPS26B-207ENST00000532160 LACTBL1A8MY62 500 aa10.1□□□□□ -0.79
VPS26B-207ENST00000532160 RIOK3O14730 519 aaKnown RBP10.1□□□□□ -0.79
VPS26B-207ENST00000532160 SYN3O14994 580 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms