RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 CPB2Q96IY4 423 aa14.57□□□□□ -0.08
LDLRAD3-202ENST00000524419 RBM41Q96IZ5 413 aaKnown RBP14.57□□□□□ -0.08
LDLRAD3-202ENST00000524419 MCEEQ96PE7 176 aa14.57□□□□□ -0.08
LDLRAD3-202ENST00000524419 HERPUD2Q9BSE4 406 aa14.57□□□□□ -0.08
LDLRAD3-202ENST00000524419 C16orf70Q9BSU1 422 aa14.57□□□□□ -0.08
LDLRAD3-202ENST00000524419 OSBPL8Q9BZF1 889 aa14.57□□□□□ -0.08
LDLRAD3-202ENST00000524419 ASB7Q9H672 318 aa14.57□□□□□ -0.08
LDLRAD3-202ENST00000524419 CHST7Q9NS84 486 aa14.57□□□□□ -0.08
LDLRAD3-202ENST00000524419 ASIC3Q9UHC3 531 aa14.57□□□□□ -0.08
LDLRAD3-202ENST00000524419 STRIP2Q9ULQ0 834 aa14.57□□□□□ -0.08
LDLRAD3-202ENST00000524419 TCRBV5S1A1TA0A578 114 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 H3BRB1 525 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 O00370 1275 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 CSDE1O75534 798 aaKnown RBP14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 SNAI1O95863 264 aaPredicted RBP14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 ITGB3P05106 788 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 APLP1P51693 650 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 MAGOHP61326 146 aaKnown RBP14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 RPL7AP62424 266 aaKnown RBP14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 GRB14Q14449 540 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 DENND1BQ6P3S1 775 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 GPR142Q7Z601 462 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 OTUD6BQ8N6M0 293 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 OR6J1Q8NGC5 347 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 CCDC114Q96M63 670 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 PARK7Q99497 189 aaKnown RBP14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 HEMGNQ9BXL5 484 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 EPB41L4BQ9H329 900 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 TUT1Q9H6E5 874 aaKnown RBP14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 ZNF236Q9UL36 1845 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 RALGAPA2Q2PPJ7 1873 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 KRT1P04264 644 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 P4HA1P13674 534 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 ARF4P18085 180 aaPredicted RBP14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 POLR2BP30876 1174 aaKnown RBP14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 ATICP31939 592 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 FKBP1BP68106 108 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 KLF1Q13351 362 aaPredicted RBP14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 BYSLQ13895 437 aaKnown RBP14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 TMEM132DQ14C87 1099 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 GRIK4Q16099 956 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 WDR72Q3MJ13 1102 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 LRRC38Q5VT99 294 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 RCOR2Q8IZ40 523 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 CENPTQ96BT3 561 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 PGM2Q96G03 612 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 SNF8Q96H20 258 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 LHX5Q9H2C1 402 aa14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 PPANQ9NQ55 473 aaKnown RBP14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 R3HDM2Q9Y2K5 976 aaKnown RBP14.56□□□□□ -0.08
LDLRAD3-202ENST00000524419 MMP3P08254 477 aa14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 ATF2P15336 505 aa14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 SMPD1P17405 629 aa14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 LIG3P49916 1009 aa14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 PIGHQ14442 188 aaPredicted RBP14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 CCNG2Q16589 344 aa14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 DUSP28Q4G0W2 176 aa14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 PPP1R15BQ5SWA1 713 aa14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 ZFYVE27Q5T4F4 411 aa14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 CYP4A22Q5TCH4 519 aa14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 PLEKHH3Q7Z736 793 aa14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 WDTC1Q8N5D0 677 aa14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 ATL2Q8NHH9 583 aa14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 MAML3Q96JK9 1138 aa14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 ADPGKQ9BRR6 497 aa14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 SMYD3Q9H7B4 428 aa14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 CYP3A43Q9HB55 503 aa14.55□□□□□ -0.08
LDLRAD3-202ENST00000524419 TSPAN1O60635 241 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 ITIH2P19823 946 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 RAD23BP54727 409 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 CAV1Q03135 178 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 ZNF252P-AS1Q0IIN9 211 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 NFX1Q12986 1120 aaKnown RBP14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 TMEM109Q9BVC6 243 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 SDCBP2Q9H190 292 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 ABHD16BQ9H3Z7 469 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 GBA2Q9HCG7 927 aaPredicted RBP14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 KLHL11Q9NVR0 708 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 C5orf60A6NFR6 353 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 FSBPO95073 299 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 HOXD8P13378 290 aaPredicted RBP14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 RARGP13631 454 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 CDH8P55286 799 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 ACVR2BQ13705 512 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 DGKDQ16760 1214 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 FAM110CQ1W6H9 321 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 SLC10A6Q3KNW5 377 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 C6orf89Q6UWU4 347 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 ZNF410Q86VK4 478 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 CCDC25Q86WR0 208 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 NIPA2Q8N8Q9 360 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 RAPGEF5Q92565 580 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 RNF25Q96BH1 459 aaPredicted RBP14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 SLITRK1Q96PX8 696 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 TINF2Q9BSI4 451 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 VRTNQ9H8Y1 702 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 DDX56Q9NY93 547 aaKnown RBP14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 ITGA11Q9UKX5 1188 aa14.54□□□□□ -0.08
LDLRAD3-202ENST00000524419 PI4K2BG5E9Z4 385 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms