RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 MX1P20591 662 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 CYP2B6P20813 491 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 TKTP29401 623 aaKnown RBP7.95□□□□□ -1.14
HDAC3-216ENST00000523088 HMOX2P30519 316 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 GUCY1A2P33402 732 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 CCT5P48643 541 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 CDK8P49336 464 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 AARSP49588 968 aaKnown RBP eCLIP7.95□□□□□ -1.14
HDAC3-216ENST00000523088 NT5C2P49902 561 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 CDKN1CP49918 316 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-216ENST00000523088 COG7P83436 770 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 SERINC3Q13530 473 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 GRB14Q14449 540 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 CCNG2Q16589 344 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 IGSF11Q5DX21 431 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 MORN1Q5T089 497 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 LIMS2Q7Z4I7 341 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 GALNT7Q86SF2 657 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 C7orf31Q8N865 590 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 ZNF565Q8N9K5 539 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 STKLD1Q8NE28 680 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 CDC26Q8NHZ8 85 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 ANGPTL6Q8NI99 470 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 IFI44Q8TCB0 444 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 ACER1Q8TDN7 264 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 OXER1Q8TDS5 423 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 OSCP1Q8WVF1 389 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 TRIB2Q92519 343 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 NCSTNQ92542 709 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 SEPT8Q92599 483 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 RNF34Q969K3 372 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 ALKBH8Q96BT7 664 aaKnown RBP7.95□□□□□ -1.14
HDAC3-216ENST00000523088 EDC3Q96F86 508 aaKnown RBP7.95□□□□□ -1.14
HDAC3-216ENST00000523088 SLC47A1Q96FL8 570 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 PGBD1Q96JS3 809 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 ZC3H10Q96K80 434 aaKnown RBP7.95□□□□□ -1.14
HDAC3-216ENST00000523088 EGLN2Q96KS0 407 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 PPM1MQ96MI6 270 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 TTC25Q96NG3 672 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 TBC1D32Q96NH3 1257 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 STRBPQ96SI9 672 aaKnown RBP7.95□□□□□ -1.14
HDAC3-216ENST00000523088 SHCBP1LQ9BZQ2 653 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 NT5C3AQ9H0P0 336 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 CDH19Q9H159 772 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 DENND2DQ9H6A0 471 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-216ENST00000523088 TRPV4Q9HBA0 871 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 MKNK2Q9HBH9 465 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 TXNRD2Q9NNW7 524 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 SH2B1Q9NRF2 756 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-216ENST00000523088 INIPQ9NRY2 104 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 BLOC1S4Q9NUP1 217 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 ARMC1Q9NVT9 282 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 ANO10Q9NW15 660 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 EURLQ9NYK6 297 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.95□□□□□ -1.14
HDAC3-216ENST00000523088 EXTL2Q9UBQ6 330 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 TRIM10Q9UDY6 481 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 MAPRE3Q9UPY8 281 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 CHMP2BQ9UQN3 213 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 NFE2L3Q9Y4A8 694 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 ALPK3Q96L96 1907 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 MAGEB16A2A368 324 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 PTPDC1A2A3K4 754 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 GOLGA8KD6RF30 607 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 GOLGA8TH3BQL2 631 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 GPAA1O43292 621 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 NBNO60934 754 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 NIPSNAP2O75323 286 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 SUPT3HO75486 399 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 MICAL2O94851 1124 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 IL33O95760 270 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 KRT6AP02538 564 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 MT-ND3P03897 115 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 KRT6BP04259 564 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 GOLGA8HP0CJ92 632 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 THEGLP0DJG4 465 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 FDX1P10109 184 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 CSF2RAP15509 400 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 TMEM11P17152 192 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 SYT1P21579 422 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 PTPREP23469 700 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 ACAT1P24752 427 aaKnown RBP7.94□□□□□ -1.14
HDAC3-216ENST00000523088 VARSP26640 1264 aaKnown RBP7.94□□□□□ -1.14
HDAC3-216ENST00000523088 PMLP29590 882 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 ADCY8P40145 1251 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 IFNAR2P48551 515 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 RENBPP51606 427 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 VCPP55072 806 aaKnown RBP7.94□□□□□ -1.14
HDAC3-216ENST00000523088 HADHBP55084 474 aaKnown RBP7.94□□□□□ -1.14
HDAC3-216ENST00000523088 DHX34Q14147 1143 aaKnown RBP7.94□□□□□ -1.14
HDAC3-216ENST00000523088 ZNF124Q15973 351 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 CDONQ4KMG0 1287 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 HSP90AA5PQ58FG0 334 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 FBXO48Q5FWF7 155 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 PPP6R3Q5H9R7 873 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-216ENST00000523088 TCTE1Q5JU00 501 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 HABP4Q5JVS0 413 aaKnown RBP7.94□□□□□ -1.14
HDAC3-216ENST00000523088 ZNF362Q5T0B9 420 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-216ENST00000523088 PPP2R2DQ66LE6 453 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 OLFML2BQ68BL8 750 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms