RNA–Protein interactions for RNA: ENST00000522262.1

CDH12-208, Transcript of cadherin 12, humanhuman

TSL 2 BASIC

Gene CDH12, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-208ENST00000522262 LIMA1Q9UHB6 759 aaKnown RBP7.19□□□□□ -1.26
CDH12-208ENST00000522262 TTC28Q96AY4 2481 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 LRRC10BA6NIK2 292 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 H3BQ06 376 aaPredicted RBP7.19□□□□□ -1.26
CDH12-208ENST00000522262 RNF225M0QZC1 329 aaPredicted RBP7.19□□□□□ -1.26
CDH12-208ENST00000522262 TRAPPC3O43617 180 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 PHACTR2O75167 634 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 TACC1O75410 805 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 NOL4O94818 638 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 LETM1O95202 739 aaPredicted RBP7.19□□□□□ -1.26
CDH12-208ENST00000522262 PDGFRBP09619 1106 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 PNMA6AP0CW24 399 aaPredicted RBP7.19□□□□□ -1.26
CDH12-208ENST00000522262 WARSP23381 471 aaKnown RBP7.19□□□□□ -1.26
CDH12-208ENST00000522262 PON1P27169 355 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 ATICP31939 592 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 NDUFV1P49821 464 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 RAB33AQ14088 237 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 SGSM1Q2NKQ1 1148 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 KIAA1841Q6NSI8 718 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 TRIM65Q6PJ69 517 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 TMEM184AQ6ZMB5 413 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 PAQR9Q6ZVX9 377 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 ANKS3Q6ZW76 656 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 RRAGAQ7L523 313 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 GPR65Q8IYL9 337 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 EFHBQ8N7U6 833 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 MMS19Q96T76 1030 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 ZSWIM1Q9BR11 485 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 ELOVL4Q9GZR5 314 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 ACP6Q9NPH0 428 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 GCNT4Q9P109 453 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 FBXW11Q9UKB1 542 aa7.19□□□□□ -1.26
CDH12-208ENST00000522262 MTMR11A4FU01 709 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 CARNS1A5YM72 827 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 EEF1GP26641 437 aaKnown RBP7.18□□□□□ -1.26
CDH12-208ENST00000522262 MTIF2P46199 727 aaKnown RBP7.18□□□□□ -1.26
CDH12-208ENST00000522262 GPR15P49685 360 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 COPB1P53618 953 aaKnown RBP7.18□□□□□ -1.26
CDH12-208ENST00000522262 ARPP19P56211 112 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 INCA1Q0VD86 236 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 MYO1EQ12965 1108 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 CLUL1Q15846 466 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 PDE12Q6L8Q7 609 aaKnown RBP7.18□□□□□ -1.26
CDH12-208ENST00000522262 C12orf29Q8N999 325 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 ATAD1Q8NBU5 361 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 RNF214Q8ND24 703 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 APPL2Q8NEU8 664 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 FAM200AQ8TCP9 573 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 ZNF592Q92610 1267 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 ZNF707Q96C28 371 aaPredicted RBP7.18□□□□□ -1.26
CDH12-208ENST00000522262 PABPC5Q96DU9 382 aaKnown RBP7.18□□□□□ -1.26
CDH12-208ENST00000522262 APOL5Q9BWW9 433 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 INTS2Q9H0H0 1204 aaKnown RBP7.18□□□□□ -1.26
CDH12-208ENST00000522262 S1PR5Q9H228 398 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 MAN1C1Q9NR34 630 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 CLDND1Q9NY35 253 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 GTF3C4Q9UKN8 822 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 SIK3Q9Y2K2 1263 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 VPS13AQ96RL7 3174 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 DOCK8Q8NF50 2099 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 PATJQ8NI35 1801 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 HUS1O60921 280 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 CILPO75339 1184 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 PAPLNO95428 1278 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 CD58P19256 250 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 KLRC2P26717 231 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 NDST1P52848 882 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 TPD52L1Q16890 204 aaPredicted RBP7.18□□□□□ -1.26
CDH12-208ENST00000522262 SLC39A12Q504Y0 691 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 ZNF667Q5HYK9 610 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 INTS6LQ5JSJ4 861 aaKnown RBP7.18□□□□□ -1.26
CDH12-208ENST00000522262 ZNF280DQ6N043 979 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 FAM171BQ6P995 826 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 EHBP1Q8NDI1 1231 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 NIF3L1Q9GZT8 377 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.18□□□□□ -1.26
CDH12-208ENST00000522262 OBSL1O75147 1896 aa7.18□□□□□ -1.26
CDH12-208ENST00000522262 BECN2A8MW95 431 aa7.17□□□□□ -1.26
CDH12-208ENST00000522262 CLDN5O00501 218 aa7.17□□□□□ -1.26
CDH12-208ENST00000522262 ATF6P18850 670 aa7.17□□□□□ -1.26
CDH12-208ENST00000522262 ADCY1Q08828 1119 aa7.17□□□□□ -1.26
CDH12-208ENST00000522262 GPR17Q13304 367 aa7.17□□□□□ -1.26
CDH12-208ENST00000522262 CUL2Q13617 745 aa7.17□□□□□ -1.26
CDH12-208ENST00000522262 ZNF394Q53GI3 561 aa7.17□□□□□ -1.26
CDH12-208ENST00000522262 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.17□□□□□ -1.26
CDH12-208ENST00000522262 ZNF461Q8TAF7 563 aa7.17□□□□□ -1.26
CDH12-208ENST00000522262 PCED1BQ96HM7 432 aa7.17□□□□□ -1.26
CDH12-208ENST00000522262 NAA15Q9BXJ9 866 aaKnown RBP7.17□□□□□ -1.26
CDH12-208ENST00000522262 RBSNQ9H1K0 784 aa7.17□□□□□ -1.26
CDH12-208ENST00000522262 UBE2ZQ9H832 354 aaPredicted RBP7.17□□□□□ -1.26
CDH12-208ENST00000522262 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.17□□□□□ -1.26
CDH12-208ENST00000522262 CISHQ9NSE2 258 aa7.17□□□□□ -1.26
CDH12-208ENST00000522262 STK39Q9UEW8 545 aa7.17□□□□□ -1.26
CDH12-208ENST00000522262 SLC27A5Q9Y2P5 690 aa7.17□□□□□ -1.26
CDH12-208ENST00000522262 ZNF638Q14966 1978 aaKnown RBP7.17□□□□□ -1.26
CDH12-208ENST00000522262 TCF20Q9UGU0 1960 aaKnown RBP7.17□□□□□ -1.26
CDH12-208ENST00000522262 GRXCR2A6NFK2 248 aa7.17□□□□□ -1.26
CDH12-208ENST00000522262 P4HA2O15460 535 aa7.17□□□□□ -1.26
CDH12-208ENST00000522262 BEST1O76090 585 aa7.17□□□□□ -1.26
CDH12-208ENST00000522262 FGFR1OPO95684 399 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms