RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 NCOA4Q13772 614 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 TNFAIP1Q13829 316 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 FASTKD3Q14CZ7 662 aaKnown RBP7.03□□□□□ -1.28
CDH12-203ENST00000517378 TAZQ16635 292 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 CENPUQ71F23 418 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 PCGF5Q86SE9 256 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 PRUNE1Q86TP1 453 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 WDR49Q8IV35 697 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 BRSK2Q8IWQ3 736 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 AGGF1Q8N302 714 aaeCLIP7.03□□□□□ -1.28
CDH12-203ENST00000517378 TTLL6Q8N841 843 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 ASAP3Q8TDY4 903 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 C10orf82Q8WW14 230 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 UTP4Q969X6 686 aaKnown RBP7.03□□□□□ -1.28
CDH12-203ENST00000517378 TBC1D31Q96DN5 1066 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 RSRC1Q96IZ7 334 aaKnown RBP7.03□□□□□ -1.28
CDH12-203ENST00000517378 WNK4Q96J92 1243 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 NIFKQ9BYG3 293 aaKnown RBP7.03□□□□□ -1.28
CDH12-203ENST00000517378 MYLK2Q9H1R3 596 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 MYOZ2Q9NPC6 264 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 DONSONQ9NYP3 566 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 PSMC3IPQ9P2W1 217 aaPredicted RBP7.03□□□□□ -1.28
CDH12-203ENST00000517378 ZNF214Q9UL59 606 aaPredicted RBP7.03□□□□□ -1.28
CDH12-203ENST00000517378 PHTF1Q9UMS5 762 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 RPL26L1Q9UNX3 145 aaKnown RBP7.03□□□□□ -1.28
CDH12-203ENST00000517378 CHKBQ9Y259 395 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 TELO2Q9Y4R8 837 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 IVNS1ABPQ9Y6Y0 642 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 E7ESA3 106 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 SMAPO00193 183 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 ZWINTO95229 277 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 OATP04181 439 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 EDN1P05305 212 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 KRT10P13645 584 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 HSPA1LP34931 641 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 ZNF280AP59817 542 aaPredicted RBP7.03□□□□□ -1.28
CDH12-203ENST00000517378 TGFB2P61812 414 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 LACTBP83111 547 aaPredicted RBP7.03□□□□□ -1.28
CDH12-203ENST00000517378 OGDHQ02218 1023 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 GPS1Q13098 491 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 PKN2Q16513 984 aaKnown RBP7.03□□□□□ -1.28
CDH12-203ENST00000517378 ZBTB41Q5SVQ8 909 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 TRMT1LQ7Z2T5 733 aaKnown RBP7.03□□□□□ -1.28
CDH12-203ENST00000517378 KIF2BQ8N4N8 673 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 OR5B17Q8NGF7 314 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 CFAP61Q8NHU2 1237 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 MZB1Q8WU39 189 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 NSMCE1Q8WV22 266 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 MIEF2Q96C03 454 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 SMC6Q96SB8 1091 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 MSTO1Q9BUK6 570 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 BATF3Q9NR55 127 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 ZNF277Q9NRM2 450 aaPredicted RBP7.03□□□□□ -1.28
CDH12-203ENST00000517378 CYP39A1Q9NYL5 469 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 ZMYND8Q9ULU4 1186 aaPredicted RBP7.03□□□□□ -1.28
CDH12-203ENST00000517378 ZNF148Q9UQR1 794 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 USTQ9Y2C2 406 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 CTDP1Q9Y5B0 961 aaPredicted RBP7.03□□□□□ -1.28
CDH12-203ENST00000517378 E7ENQ6 273 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 PI4K2BG5E9Z4 385 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 ZSCAN5DPP0CG00 497 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 EIF4BP23588 611 aaKnown RBP7.02□□□□□ -1.29
CDH12-203ENST00000517378 RFC5P40937 340 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 GEMIN4P57678 1058 aaKnown RBP7.02□□□□□ -1.29
CDH12-203ENST00000517378 GPX6P59796 221 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 ATP11AP98196 1134 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 MYO1EQ12965 1108 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 SETDB1Q15047 1291 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 GNPTABQ3T906 1256 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 ATP13A4Q4VNC1 1196 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 DNAJC24Q6P3W2 148 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 ZPBP2Q6X784 338 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 NIM1KQ8IY84 436 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 DEPTORQ8TB45 409 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 SH3TC2Q8TF17 1288 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 FNIP1Q8TF40 1166 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 MCEEQ96PE7 176 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 TLE6Q9H808 572 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 KLHL11Q9NVR0 708 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 L3MBTL1Q9Y468 752 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 SNCAIPQ9Y6H5 919 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 CLUHO75153 1309 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 A8MUI8 341 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 F8VP50 259 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 K7ERI5 159 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 LIN7AO14910 233 aaPredicted RBP7.02□□□□□ -1.29
CDH12-203ENST00000517378 HNRNPCL1O60812 293 aaKnown RBP7.02□□□□□ -1.29
CDH12-203ENST00000517378 ATF7P17544 494 aaPredicted RBP7.02□□□□□ -1.29
CDH12-203ENST00000517378 RPA3P35244 121 aaPredicted RBP7.02□□□□□ -1.29
CDH12-203ENST00000517378 BACE1P56817 501 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 SLC25A11Q02978 314 aaKnown RBP7.02□□□□□ -1.29
CDH12-203ENST00000517378 DNAJC3Q13217 504 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 TARBP2Q15633 366 aaKnown RBP7.02□□□□□ -1.29
CDH12-203ENST00000517378 HIF1AQ16665 826 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 MTERF2Q49AM1 385 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 CMPK2Q5EBM0 449 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 SNRNP48Q6IEG0 339 aaKnown RBP7.02□□□□□ -1.29
CDH12-203ENST00000517378 ADGRD1Q6QNK2 874 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 BBS12Q6ZW61 710 aa7.02□□□□□ -1.29
CDH12-203ENST00000517378 PPIL6Q8IXY8 311 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms