RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 RPUSD3Q6P087 351 aaKnown RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 ABHD15Q6UXT9 468 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 CEP128Q6ZU80 1094 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 C22orf34Q6ZV56 151 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 IKBIPQ70UQ0 350 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 SZRD1Q7Z422 152 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 THAP5Q7Z6K1 395 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 TTC30AQ86WT1 665 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 ERC1Q8IUD2 1116 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 RASGRP3Q8IV61 690 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 OR8H3Q8N146 312 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 NUP93Q8N1F7 819 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 ZGPATQ8N5A5 531 aaKnown RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 TRIML1Q8N9V2 468 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 ARRDC4Q8NCT1 418 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 NUP43Q8NFH3 380 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 OR8H1Q8NGG4 311 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 OR56A3Q8NH54 315 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 TTLL11Q8NHH1 800 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 SPSB4Q96A44 273 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 ACDQ96AP0 544 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 SDCCAG3Q96C92 435 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 NEIL1Q96FI4 390 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 DYDC2Q96IM9 177 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 TRIM47Q96LD4 638 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 SPAG5Q96R06 1193 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 EYA3Q99504 573 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 COL25A1Q9BXS0 654 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 MAK16Q9BXY0 300 aaKnown RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 OR10A4Q9H209 315 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 ABHD16BQ9H3Z7 469 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 SMARCAD1Q9H4L7 1026 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 SMURF2Q9HAU4 748 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 RXFP1Q9HBX9 757 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 XAB2Q9HCS7 855 aaKnown RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 LANCL2Q9NS86 450 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 USP40Q9NVE5 1235 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 SPATA6Q9NWH7 488 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 ZSCAN32Q9NX65 697 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 KCMF1Q9P0J7 381 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 BTBD7Q9P203 1132 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 PI4KBQ9UBF8 816 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 SEL1LQ9UBV2 794 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 DNAI1Q9UI46 699 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 KCND3Q9UK17 655 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 AJAP1Q9UKB5 411 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 GTF3C4Q9UKN8 822 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 TAF6LQ9Y6J9 622 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 PIAS3Q9Y6X2 628 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 C17orf113A0A1B0GUU1 675 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 A0A1W2PQ45 241 aaPredicted RBP4□□□□□ -1.77
HMGB1P22-201ENST00000505315 A0A1W2PQY0 241 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 MBD3L4A6NDZ8 208 aaPredicted RBP4□□□□□ -1.77
HMGB1P22-201ENST00000505315 MBD3L3A6NE82 208 aaPredicted RBP4□□□□□ -1.77
HMGB1P22-201ENST00000505315 H3BNC9 293 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 CPLX1O14810 134 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 GFRA3O60609 400 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 CUTAO60888 179 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 USP2O75604 605 aaPredicted RBP4□□□□□ -1.77
HMGB1P22-201ENST00000505315 B3GALNT1O75752 331 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 WFS1O76024 890 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 GRPP07492 148 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 SPARCP09486 303 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 LTA4HP09960 611 aaKnown RBP4□□□□□ -1.77
HMGB1P22-201ENST00000505315 THEGLP0DJG4 465 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 IL1R1P14778 569 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 DESP17661 470 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 EGR1P18146 543 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 ATP5F1P24539 256 aaPredicted RBP4□□□□□ -1.77
HMGB1P22-201ENST00000505315 PSMA3P25788 255 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 HPDP32754 393 aaPredicted RBP4□□□□□ -1.77
HMGB1P22-201ENST00000505315 PTPN7P35236 360 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 PPARGP37231 505 aaPredicted RBP4□□□□□ -1.77
HMGB1P22-201ENST00000505315 EIF2DP41214 584 aaKnown RBP4□□□□□ -1.77
HMGB1P22-201ENST00000505315 CCT4P50991 539 aaKnown RBP4□□□□□ -1.77
HMGB1P22-201ENST00000505315 UCP3P55916 312 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 RTP1P59025 263 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 RPS3AP61247 264 aaKnown RBP4□□□□□ -1.77
HMGB1P22-201ENST00000505315 PSMC1P62191 440 aaKnown RBP4□□□□□ -1.77
HMGB1P22-201ENST00000505315 UBXN2AP68543 259 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 NSUN2Q08J23 767 aaKnown RBP eCLIP4□□□□□ -1.77
HMGB1P22-201ENST00000505315 STK4Q13043 487 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 PDCLQ13371 301 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 PTPN14Q15678 1187 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 SLC10A5Q5PT55 438 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 GJC2Q5T442 439 aaPredicted RBP4□□□□□ -1.77
HMGB1P22-201ENST00000505315 OGFOD3Q6PK18 319 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 CPLX2Q6PUV4 134 aaKnown RBP4□□□□□ -1.77
HMGB1P22-201ENST00000505315 SHISA2Q6UWI4 295 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 SEZ6L2Q6UXD5 910 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 BEND4Q6ZU67 534 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 LRRC8DQ7L1W4 858 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 FAM214BQ7L5A3 538 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 PXKQ7Z7A4 578 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 SDCCAG8Q86SQ7 713 aaPredicted RBP4□□□□□ -1.77
HMGB1P22-201ENST00000505315 FAM90A1Q86YD7 464 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 CCDC28AQ8IWP9 274 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 CNTROBQ8N137 903 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 CRIPAKQ8N1N5 446 aa4□□□□□ -1.77
HMGB1P22-201ENST00000505315 TMEM130Q8N3G9 435 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms