RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 MED15Q96RN5 788 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 PPP1R9BQ96SB3 815 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 HEPHQ9BQS7 1158 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 TLR10Q9BXR5 811 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 STK33Q9BYT3 514 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 MAGEB5Q9BZ81 275 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 XYLT2Q9H1B5 865 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 RNPEPQ9H4A4 650 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 HESX1Q9UBX0 185 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 CDYLQ9Y232 598 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 NEU2Q9Y3R4 380 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 RAD54BQ9Y620 910 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 XDHP47989 1333 aa6.5□□□□□ -1.37
SSR3-208ENST00000496050 LOC102723971A0A1B0GUV8 181 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 GOLGA6L3A6NEY3 463 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 LEFTY2O00292 366 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 ZNF623O75123 536 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 SKAP2O75563 359 aaPredicted RBP6.49□□□□□ -1.37
SSR3-208ENST00000496050 SOAT2O75908 522 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 ATXN1LP0C7T5 689 aaKnown RBP6.49□□□□□ -1.37
SSR3-208ENST00000496050 IDEP14735 1019 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 CHKAP35790 457 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 ALDH9A1P49189 494 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 MAN2A2P49641 1150 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 BLMHQ13867 455 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 CNGB1Q14028 1251 aaPredicted RBP6.49□□□□□ -1.37
SSR3-208ENST00000496050 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 RRAGBQ5VZM2 374 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 METRNLQ641Q3 311 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 GGT6Q6P531 493 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 FBXO38Q6PIJ6 1188 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 LAYNQ6UX15 382 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 MAMDC4Q6UXC1 1216 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 SLC30A10Q6XR72 485 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 ZNF354CQ86Y25 554 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 TRIM63Q969Q1 353 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 MUL1Q969V5 352 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 LRRC46Q96FV0 321 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 DHX36Q9H2U1 1008 aaKnown RBP6.49□□□□□ -1.37
SSR3-208ENST00000496050 PARD6AQ9NPB6 346 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 EIF2B4Q9UI10 523 aaKnown RBP6.49□□□□□ -1.37
SSR3-208ENST00000496050 MID2Q9UJV3 735 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 SLC39A10Q9ULF5 831 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 SHOC2Q9UQ13 582 aa6.49□□□□□ -1.37
SSR3-208ENST00000496050 USP15Q9Y4E8 981 aaPredicted RBP6.49□□□□□ -1.37
SSR3-208ENST00000496050 A0A1B0GTW7 788 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 CCDC195A0A1B0GUA6 201 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 PATE3B3GLJ2 98 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 PIP5K1CO60331 668 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 RECQL4O94761 1208 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 SPATA31D3P0C874 917 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 IL1R1P14778 569 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 ACO1P21399 889 aaKnown RBP6.48□□□□□ -1.37
SSR3-208ENST00000496050 APOBEC3AP31941 199 aaPredicted RBP6.48□□□□□ -1.37
SSR3-208ENST00000496050 ARHGEF7Q14155 803 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 TMEM95Q3KNT9 176 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 MGAT5BQ3V5L5 792 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 PLA1AQ53H76 456 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 C1QL3Q5VWW1 255 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 TAPT1Q6NXT6 567 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 ZDHHC24Q6UX98 284 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 Q6ZSN1 163 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 SPATA31D4Q6ZUB0 917 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 HTR3DQ70Z44 454 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 KRT28Q7Z3Y7 464 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 GAS2L3Q86XJ1 694 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 CPXCR1Q8N123 301 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 NKAPQ8N5F7 415 aaKnown RBP6.48□□□□□ -1.37
SSR3-208ENST00000496050 NSUN7Q8NE18 718 aaKnown RBP6.48□□□□□ -1.37
SSR3-208ENST00000496050 OR56A1Q8NGH5 318 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 CYP2W1Q8TAV3 490 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 POC1BQ8TC44 478 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 Q8TCH9 128 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 LTV1Q96GA3 475 aaPredicted RBP6.48□□□□□ -1.37
SSR3-208ENST00000496050 SNX27Q96L92 541 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 TEPSINQ96N21 525 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 SLC46A1Q96NT5 459 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 MESP1Q9BRJ9 268 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 ETAA1Q9NY74 926 aa6.48□□□□□ -1.37
SSR3-208ENST00000496050 E7ENX8 843 aa6.47□□□□□ -1.37
SSR3-208ENST00000496050 RAB27BO00194 218 aa6.47□□□□□ -1.37
SSR3-208ENST00000496050 CCP110O43303 1012 aa6.47□□□□□ -1.37
SSR3-208ENST00000496050 PRICKLE3O43900 615 aaPredicted RBP6.47□□□□□ -1.37
SSR3-208ENST00000496050 GPANK1O95872 356 aa6.47□□□□□ -1.37
SSR3-208ENST00000496050 CSTBP04080 98 aaKnown RBP6.47□□□□□ -1.37
SSR3-208ENST00000496050 A1BGP04217 495 aa6.47□□□□□ -1.37
SSR3-208ENST00000496050 TPH1P17752 444 aa6.47□□□□□ -1.37
SSR3-208ENST00000496050 LRPAP1P30533 357 aa6.47□□□□□ -1.37
SSR3-208ENST00000496050 GRK6P43250 576 aa6.47□□□□□ -1.37
SSR3-208ENST00000496050 COPAP53621 1224 aa6.47□□□□□ -1.37
SSR3-208ENST00000496050 RNASE9P60153 205 aaKnown RBP6.47□□□□□ -1.37
SSR3-208ENST00000496050 TAP2Q03519 686 aa6.47□□□□□ -1.37
SSR3-208ENST00000496050 TLDC1Q6P9B6 456 aa6.47□□□□□ -1.37
SSR3-208ENST00000496050 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.47□□□□□ -1.37
SSR3-208ENST00000496050 ZNF808Q8N4W9 903 aaPredicted RBP6.47□□□□□ -1.37
SSR3-208ENST00000496050 SSBP3Q9BWW4 388 aaPredicted RBP6.47□□□□□ -1.37
SSR3-208ENST00000496050 TTYH3Q9C0H2 523 aa6.47□□□□□ -1.37
SSR3-208ENST00000496050 AGO4Q9HCK5 861 aaKnown RBP6.47□□□□□ -1.37
SSR3-208ENST00000496050 RNF181Q9P0P0 153 aa6.47□□□□□ -1.37
SSR3-208ENST00000496050 CAPN11Q9UMQ6 739 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms