RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 AREL1O15033 823 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 GRM6O15303 877 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 CDC14BO60729 498 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 RHOBTB3O94955 611 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 HSP90AA1P07900 732 aaKnown RBP5.31□□□□□ -1.56
VPS13A-211ENST00000484581 MTHFD1P11586 935 aaKnown RBP5.31□□□□□ -1.56
VPS13A-211ENST00000484581 IL1R1P14778 569 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 ALOX15P16050 662 aaPredicted RBP5.31□□□□□ -1.56
VPS13A-211ENST00000484581 ALDH1A3P47895 512 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 MEOX1P50221 254 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 ITGA8P53708 1063 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 RRADP55042 308 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 FSTL1Q12841 308 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 ADAM15Q13444 863 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 PTK2BQ14289 1009 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 SPARCL1Q14515 664 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 OTUD7BQ6GQQ9 843 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 FBXO38Q6PIJ6 1188 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 POLNQ7Z5Q5 900 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 GALNT15Q8N3T1 639 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 SDR16C5Q8N3Y7 309 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 IL17RDQ8NFM7 739 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 FBXO18Q8NFZ0 1043 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 FAM71BQ8TC56 605 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 IPCEF1Q8WWN9 437 aaPredicted RBP5.31□□□□□ -1.56
VPS13A-211ENST00000484581 ZNF503Q96F45 646 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 NECTIN3Q9NQS3 549 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 ITM2CQ9NQX7 267 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 CFAP97Q9P2B7 532 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 OAZ3Q9UMX2 235 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 RUVBL1Q9Y265 456 aaKnown RBP5.31□□□□□ -1.56
VPS13A-211ENST00000484581 FAM234BA2RU67 622 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 C2orf78A6NCI8 922 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 RRN3P2A6NIE6 340 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 PYCARD-AS1I3L0S3 204 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 EIF3FO00303 357 aaPredicted RBP5.3□□□□□ -1.56
VPS13A-211ENST00000484581 ZNF202O95125 648 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 POU6F2P78424 691 aaPredicted RBP5.3□□□□□ -1.56
VPS13A-211ENST00000484581 CREMQ03060 361 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 PCOLCEQ15113 449 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 RAB30Q15771 203 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 TAF12Q16514 161 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 RNF151Q2KHN1 245 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 LSM12Q3MHD2 195 aaKnown RBP5.3□□□□□ -1.56
VPS13A-211ENST00000484581 AFMIDQ63HM1 303 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 LMBRD2Q68DH5 695 aaPredicted RBP5.3□□□□□ -1.56
VPS13A-211ENST00000484581 TANGO2Q6ICL3 276 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 SEM1Q6ZVN7 128 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 UNC13DQ70J99 1090 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 RNF44Q7L0R7 432 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 MAATS1Q7Z4T9 603 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 MDM1Q8TC05 714 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 ZNF384Q8TF68 577 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 STON2Q8WXE9 905 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 GCDHQ92947 438 aaPredicted RBP5.3□□□□□ -1.56
VPS13A-211ENST00000484581 ZSCAN31Q96LW9 406 aaPredicted RBP5.3□□□□□ -1.56
VPS13A-211ENST00000484581 OR14A2Q96R54 314 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 SORBS1Q9BX66 1292 aaKnown RBP5.3□□□□□ -1.56
VPS13A-211ENST00000484581 PACSIN1Q9BY11 444 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 UNC45AQ9H3U1 944 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 TMEM8AQ9HCN3 771 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 SLAMF7Q9NQ25 335 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 A1CFQ9NQ94 594 aaKnown RBP5.3□□□□□ -1.56
VPS13A-211ENST00000484581 ZNF212Q9UDV6 495 aa5.3□□□□□ -1.56
VPS13A-211ENST00000484581 A0A087WWL8 130 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 AQP12BA6NM10 295 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 TRIM38O00635 465 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 TOX4O94842 621 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 GNAI2P04899 355 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 JUNP05412 331 aaKnown RBP5.29□□□□□ -1.56
VPS13A-211ENST00000484581 LDHCP07864 332 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 ITGA5P08648 1049 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 VSIG10L2P0DP72 767 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 RARBP10826 455 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 TNFAIP3P21580 790 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 MCM7P33993 719 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 MRE11P49959 708 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 PTH1RQ03431 593 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 CTBP1Q13363 440 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 CNGB1Q14028 1251 aaPredicted RBP5.29□□□□□ -1.56
VPS13A-211ENST00000484581 GAGE13Q4V321 117 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 FAM47AQ5JRC9 791 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 ARL6IP4Q66PJ3 421 aaKnown RBP5.29□□□□□ -1.56
VPS13A-211ENST00000484581 JMJD6Q6NYC1 403 aaPredicted RBP5.29□□□□□ -1.56
VPS13A-211ENST00000484581 LARP4Q71RC2 724 aaKnown RBP eCLIP5.29□□□□□ -1.56
VPS13A-211ENST00000484581 RSRC2Q7L4I2 434 aaKnown RBP5.29□□□□□ -1.56
VPS13A-211ENST00000484581 PDSS2Q86YH6 399 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 C1orf210Q8IVY1 113 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 COLGALT2Q8IYK4 626 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 VGLL2Q8N8G2 317 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 DPYSL5Q9BPU6 564 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 MAGEB5Q9BZ81 275 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 CHST8Q9H2A9 424 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 BRD9Q9H8M2 597 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 PLEKHM1Q9Y4G2 1056 aa5.29□□□□□ -1.56
VPS13A-211ENST00000484581 RBM8AQ9Y5S9 174 aaKnown RBP5.29□□□□□ -1.56
VPS13A-211ENST00000484581 WDR33Q9C0J8 1336 aaKnown RBP5.28□□□□□ -1.56
VPS13A-211ENST00000484581 PRSS29PA6NIE9 313 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 EYA2O00167 538 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 WNT10BO00744 389 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms