RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 PLCG1P19174 1290 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 MPP3Q13368 585 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 Q4G0T1 1027 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 GADL1Q6ZQY3 521 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 OR6P1Q8NGX9 317 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 GPKOWQ92917 476 aaPredicted RBP eCLIP12.04□□□□□ -0.48
U2AF1-209ENST00000475639 SARS2Q9NP81 518 aaKnown RBP12.04□□□□□ -0.48
U2AF1-209ENST00000475639 CYP26B1Q9NR63 512 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 EMILIN3Q9NT22 766 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 ETNK2Q9NVF9 386 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 NSMCE4AQ9NXX6 385 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 KIAA0391O15091 583 aaKnown RBP12.04□□□□□ -0.48
U2AF1-209ENST00000475639 CLIC2O15247 247 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 SORBS3O60504 671 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 ZCCHC18P0CG32 403 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 PYGMP11217 842 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 ZNF667Q5HYK9 610 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 RFWD3Q6PCD5 774 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 LRRC55Q6ZSA7 311 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 HORMAD1Q86X24 394 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 ZNF556Q9HAH1 456 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 GRHL1Q9NZI5 618 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 FRMPD2Q68DX3 1309 aaPredicted RBP12.04□□□□□ -0.48
U2AF1-209ENST00000475639 GCP02774 474 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 GOLGA8HP0CJ92 632 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 TYK2P29597 1187 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 ALCAMQ13740 583 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 CYLC2Q14093 348 aaPredicted RBP12.04□□□□□ -0.48
U2AF1-209ENST00000475639 EAPPQ56P03 285 aaPredicted RBP12.04□□□□□ -0.48
U2AF1-209ENST00000475639 C6orf10Q5SRN2 563 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 ARHGAP27Q6ZUM4 889 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 TLK2Q86UE8 772 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 ZNF555Q8NEP9 628 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 CCSER1Q9C0I3 900 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 DHX36Q9H2U1 1008 aaKnown RBP12.04□□□□□ -0.48
U2AF1-209ENST00000475639 HSFX1Q9UBD0 423 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 CFAP69A5D8W1 941 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 K7ERI5 159 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 C16orf72Q14CZ0 275 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 RCN1Q15293 331 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 LONRF1Q17RB8 773 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 PARVGQ9HBI0 331 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 SYBUQ9NX95 663 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 AURKCQ9UQB9 309 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 FLT1P17948 1338 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 BCORQ6W2J9 1755 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 CBX6O95503 412 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 TP53BP2Q13625 1128 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 LRRC41Q15345 812 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 CDO1Q16878 200 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 SLFN11Q7Z7L1 901 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 KBTBD2Q8IY47 623 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 PCIF1Q9H4Z3 704 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 FAM205AQ6ZU69 1335 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 C5orf58C9J3I9 102 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 PIK3R2O00459 728 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 EYA4O95677 639 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 ACTR2P61160 394 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 HIC1Q14526 733 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 Q3C1V9 767 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 SLC44A4Q53GD3 710 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 COBLL1Q53SF7 1204 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 SLFN12LQ6IEE8 588 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 NT5DC3Q86UY8 548 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 P3H2Q8IVL5 708 aa12.03□□□□□ -0.48
U2AF1-209ENST00000475639 ST13P5Q8NFI4 369 aaPredicted RBP12.03□□□□□ -0.48
U2AF1-209ENST00000475639 LYNP07948 512 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 RTP1P59025 263 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 LRRC74BQ6ZQY2 392 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 JAMLQ86YT9 394 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 KRT78Q8N1N4 520 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 HES6Q96HZ4 224 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 C7orf25Q9BPX7 421 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 KLHL31Q9H511 634 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 RPF1Q9H9Y2 349 aaKnown RBP12.02□□□□□ -0.48
U2AF1-209ENST00000475639 CACNA2D2Q9NY47 1150 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 COMMD3-BMI1R4GMX3 469 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 PFASO15067 1338 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 ADAMTS7Q9UKP4 1686 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 RBM47A0AV96 593 aaKnown RBP12.02□□□□□ -0.48
U2AF1-209ENST00000475639 TMEM191CA6NGB0 347 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 GOLGA8JA6NMD2 632 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 SMIM22K7EJ46 135 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 STK25O00506 426 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 SEC24DO94855 1032 aaPredicted RBP12.02□□□□□ -0.48
U2AF1-209ENST00000475639 LRRC74AQ0VAA2 488 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 MKRN3Q13064 507 aaKnown RBP12.02□□□□□ -0.48
U2AF1-209ENST00000475639 DCAF12L1Q5VU92 463 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 OR6B3Q8NGW1 331 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 HIC2Q96JB3 615 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 MTA3Q9BTC8 594 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 SLC7A5P2Q9GIP4 190 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 STAP1Q9ULZ2 295 aa12.02□□□□□ -0.48
U2AF1-209ENST00000475639 PRG3Q9Y2Y8 225 aaPredicted RBP12.02□□□□□ -0.48
U2AF1-209ENST00000475639 CNTNAP5Q8WYK1 1306 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 ANGPT2O15123 496 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 TBL3Q12788 808 aaKnown RBP12.02□□□□□ -0.49
U2AF1-209ENST00000475639 ABCB5Q2M3G0 1257 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 LIN52Q52LA3 116 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 ASPRV1Q53RT3 343 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms