RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 TDRD10Q5VZ19 366 aaKnown RBP13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 ISM2Q6H9L7 571 aa13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 MTSS1LQ765P7 747 aa13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 OSTM1Q86WC4 334 aa13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 SLC44A3Q8N4M1 653 aa13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 C2orf15Q8WU43 125 aaKnown RBP13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 TMEM174Q8WUU8 243 aa13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 NXPE3Q969Y0 559 aa13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 EEF2KMTQ96G04 330 aa13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 TIGD1Q96MW7 591 aa13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 LPIN3Q9BQK8 851 aa13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 ACBD6Q9BR61 282 aa13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 SNX25Q9H3E2 840 aa13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 SLITRK6Q9H5Y7 841 aa13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 TMLHEQ9NVH6 421 aa13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 NXF1Q9UBU9 619 aaKnown RBP13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 HCN4Q9Y3Q4 1203 aa13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 PCDHB5Q9Y5E4 795 aa13.53□□□□□ -0.24
PPP1R3F-204ENST00000471261 ANHXE9PGG2 379 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 AKAP3O75969 853 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 CFHP08603 1231 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 PDGFRBP09619 1106 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 KRT13P13646 458 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 GJA1P17302 382 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 PCSK1P29120 753 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 CCR2P41597 374 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 PRCPP42785 496 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 AP3M2P53677 418 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 PSMC1P62191 440 aaKnown RBP13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 NCOA4Q13772 614 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 VEPH1Q14D04 833 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 TAF12Q16514 161 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 ZNF699Q32M78 642 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 INTS6LQ5JSJ4 861 aaKnown RBP13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 DPH6Q7L8W6 267 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 ITIH5Q86UX2 942 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 SUGP1Q8IWZ8 645 aaKnown RBP13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 FAM186BQ8IYM0 893 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 SPPL2BQ8TCT7 592 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 GPR152Q8TDT2 470 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 FGF14Q92915 247 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 SYAP1Q96A49 352 aaPredicted RBP13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 KXD1Q9BQD3 176 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 PI4K2AQ9BTU6 479 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 RPP25Q9BUL9 199 aaKnown RBP13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 DNAJC25Q9H1X3 360 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 MFSD1Q9H3U5 465 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 AVENQ9NQS1 362 aaPredicted RBP13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 GDE1Q9NZC3 331 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 HSFX1Q9UBD0 423 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 GTF3C4Q9UKN8 822 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 DUSP12Q9UNI6 340 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 TSC2P49815 1807 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 TECTAO75443 2155 aa13.52□□□□□ -0.25
PPP1R3F-204ENST00000471261 MYO10Q9HD67 2058 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 DOCK6Q96HP0 2047 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 NRG2O14511 850 aaPredicted RBP13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 GABRDO14764 452 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 PDGFBP01127 241 aaPredicted RBP13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 TRIM49P0CI25 452 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 TRIM49CP0CI26 452 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 LMO2P25791 158 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 ATICP31939 592 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 PSMC2P35998 433 aaKnown RBP13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 VAMP7P51809 220 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 CLDN10P78369 228 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 TEAD2Q15562 447 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 NFE2Q16621 373 aaPredicted RBP13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 NFIL3Q16649 462 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 CCDC142Q17RM4 750 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 PRSS36Q5K4E3 855 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 SCARA5Q6ZMJ2 495 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 INTS8Q75QN2 995 aaKnown RBP13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 DNAJB7Q7Z6W7 309 aaPredicted RBP13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 LEMD2Q8NC56 503 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 OR6B3Q8NGW1 331 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 SPATA18Q8TC71 538 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 GIPC2Q8TF65 315 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 KBTBD7Q8WVZ9 684 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 PSMG2Q969U7 264 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 ELMO3Q96BJ8 720 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 TSG101Q99816 390 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 SYT15Q9BQS2 421 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 MMRN2Q9H8L6 949 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.51□□□□□ -0.251e-18■■■■■ 447.2
PPP1R3F-204ENST00000471261 ASB3Q9Y575 518 aa13.51□□□□□ -0.25
PPP1R3F-204ENST00000471261 A0A1W2PRU2 124 aa13.5□□□□□ -0.25
PPP1R3F-204ENST00000471261 MYBPHLA2RUH7 354 aa13.5□□□□□ -0.25
PPP1R3F-204ENST00000471261 ATP2C2O75185 946 aa13.5□□□□□ -0.25
PPP1R3F-204ENST00000471261 C4BPAP04003 597 aaKnown RBP13.5□□□□□ -0.25
PPP1R3F-204ENST00000471261 HAPLN1P10915 354 aaPredicted RBP13.5□□□□□ -0.25
PPP1R3F-204ENST00000471261 SRFP11831 508 aa13.5□□□□□ -0.25
PPP1R3F-204ENST00000471261 ATF6P18850 670 aa13.5□□□□□ -0.25
PPP1R3F-204ENST00000471261 WARSP23381 471 aaKnown RBP13.5□□□□□ -0.25
PPP1R3F-204ENST00000471261 CYP2F1P24903 491 aa13.5□□□□□ -0.25
PPP1R3F-204ENST00000471261 GNL1P36915 607 aaPredicted RBP13.5□□□□□ -0.25
PPP1R3F-204ENST00000471261 PIK3CAP42336 1068 aa13.5□□□□□ -0.25
PPP1R3F-204ENST00000471261 GPR15P49685 360 aa13.5□□□□□ -0.25
PPP1R3F-204ENST00000471261 UBE2HP62256 183 aa13.5□□□□□ -0.25
PPP1R3F-204ENST00000471261 STIM1Q13586 685 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms