RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 SMARCE1Q969G3 411 aa16.57■□□□□ 0.24
FDPS-208ENST00000470171 SHDQ96IW2 340 aa16.57■□□□□ 0.24
FDPS-208ENST00000470171 CORO1BQ9BR76 489 aa16.57■□□□□ 0.24
FDPS-208ENST00000470171 DDX43Q9NXZ2 648 aaKnown RBP16.57■□□□□ 0.24
FDPS-208ENST00000470171 CDH9Q9ULB4 789 aa16.57■□□□□ 0.24
FDPS-208ENST00000470171 L1RE1Q9UN81 338 aa16.57■□□□□ 0.24
FDPS-208ENST00000470171 MYH15Q9Y2K3 1946 aa16.57■□□□□ 0.24
FDPS-208ENST00000470171 ASGR2P07307 311 aa16.56■□□□□ 0.24
FDPS-208ENST00000470171 WARSP23381 471 aaKnown RBP16.56■□□□□ 0.24
FDPS-208ENST00000470171 CDC25CP30307 473 aa16.56■□□□□ 0.24
FDPS-208ENST00000470171 GTF2H1P32780 548 aa16.56■□□□□ 0.24
FDPS-208ENST00000470171 TNNC1P63316 161 aa16.56■□□□□ 0.24
FDPS-208ENST00000470171 SGSM1Q2NKQ1 1148 aa16.56■□□□□ 0.24
FDPS-208ENST00000470171 ARHGAP15Q53QZ3 475 aa16.56■□□□□ 0.24
FDPS-208ENST00000470171 INTS6LQ5JSJ4 861 aaKnown RBP16.56■□□□□ 0.24
FDPS-208ENST00000470171 FOXR2Q6PJQ5 311 aa16.56■□□□□ 0.24
FDPS-208ENST00000470171 HFE2Q6ZVN8 426 aa16.56■□□□□ 0.24
FDPS-208ENST00000470171 ATAD1Q8NBU5 361 aa16.56■□□□□ 0.24
FDPS-208ENST00000470171 ELSPBP1Q96BH3 223 aa16.56■□□□□ 0.24
FDPS-208ENST00000470171 TSG101Q99816 390 aa16.56■□□□□ 0.24
FDPS-208ENST00000470171 FAM124BQ9H5Z6 455 aaPredicted RBP16.56■□□□□ 0.24
FDPS-208ENST00000470171 TRPV4Q9HBA0 871 aa16.56■□□□□ 0.24
FDPS-208ENST00000470171 UXTQ9UBK9 157 aaPredicted RBP16.56■□□□□ 0.24
FDPS-208ENST00000470171 FAM86C2PA6NEL3 165 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 CETN3O15182 167 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 OR4Q2P0C623 313 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 CSH1P0DML2 217 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 CSH2P0DML3 217 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 HAPLN1P10915 354 aaPredicted RBP16.55■□□□□ 0.24
FDPS-208ENST00000470171 NR2F2P24468 414 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 DDX6P26196 483 aaKnown RBP eCLIP16.55■□□□□ 0.24
FDPS-208ENST00000470171 MAGEA11P43364 429 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 LRRC63Q05C16 580 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 ADAM9Q13443 819 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 SOWAHAQ2M3V2 549 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 WDR72Q3MJ13 1102 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 MGAT5BQ3V5L5 792 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 VSTM1Q6UX27 236 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 DNAJB7Q7Z6W7 309 aaPredicted RBP16.55■□□□□ 0.24
FDPS-208ENST00000470171 ITFG1Q8TB96 612 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 CHAMP1Q96JM3 812 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 PGLYRP2Q96PD5 576 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 GCNAQ96QF7 691 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 MMS19Q96T76 1030 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 RTP3Q9BQQ7 232 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 SNX25Q9H3E2 840 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 MFSD1Q9H3U5 465 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 CEP72Q9P209 647 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 FBXL21Q9UKT6 434 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 NUMBLQ9Y6R0 609 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 CITO14578 2027 aa16.55■□□□□ 0.24
FDPS-208ENST00000470171 GNL1P36915 607 aaPredicted RBP16.54■□□□□ 0.24
FDPS-208ENST00000470171 VAMP7P51809 220 aa16.54■□□□□ 0.24
FDPS-208ENST00000470171 NTHL1P78549 312 aa16.54■□□□□ 0.24
FDPS-208ENST00000470171 FKBP3Q00688 224 aaKnown RBP16.54■□□□□ 0.24
FDPS-208ENST00000470171 BIRC3Q13489 604 aa16.54■□□□□ 0.24
FDPS-208ENST00000470171 CEP135Q66GS9 1140 aa16.54■□□□□ 0.24
FDPS-208ENST00000470171 FAM171BQ6P995 826 aa16.54■□□□□ 0.24
FDPS-208ENST00000470171 C1orf228Q6PIY5 440 aa16.54■□□□□ 0.24
FDPS-208ENST00000470171 SPATA2LQ8IUW3 424 aaPredicted RBP16.54■□□□□ 0.24
FDPS-208ENST00000470171 TTC39CQ8N584 583 aa16.54■□□□□ 0.24
FDPS-208ENST00000470171 CCDC150Q8NCX0 1101 aa16.54■□□□□ 0.24
FDPS-208ENST00000470171 DEPDC1BQ8WUY9 529 aa16.54■□□□□ 0.24
FDPS-208ENST00000470171 SMARCD2Q92925 531 aa16.54■□□□□ 0.24
FDPS-208ENST00000470171 IMPG2Q9BZV3 1241 aa16.54■□□□□ 0.24
FDPS-208ENST00000470171 ZFP14Q9HCL3 533 aa16.54■□□□□ 0.24
FDPS-208ENST00000470171 HCFC1R1Q9NWW0 138 aa16.54■□□□□ 0.24
FDPS-208ENST00000470171 OBP2AQ9NY56 170 aa16.54■□□□□ 0.24
FDPS-208ENST00000470171 PTPRJQ12913 1337 aa16.53■□□□□ 0.24
FDPS-208ENST00000470171 VNN2O95498 520 aa16.53■□□□□ 0.24
FDPS-208ENST00000470171 CST3P01034 146 aaPredicted RBP16.53■□□□□ 0.24
FDPS-208ENST00000470171 C4BPAP04003 597 aaKnown RBP16.53■□□□□ 0.24
FDPS-208ENST00000470171 PRR29P0C7W0 189 aa16.53■□□□□ 0.24
FDPS-208ENST00000470171 MLLT6P55198 1093 aaPredicted RBP16.53■□□□□ 0.24
FDPS-208ENST00000470171 UBE2HP62256 183 aa16.53■□□□□ 0.24
FDPS-208ENST00000470171 PRKCQQ04759 706 aa16.53■□□□□ 0.24
FDPS-208ENST00000470171 NCOA4Q13772 614 aa16.53■□□□□ 0.24
FDPS-208ENST00000470171 ZACNQ401N2 412 aa16.53■□□□□ 0.24
FDPS-208ENST00000470171 ZCWPW2Q504Y3 356 aa16.53■□□□□ 0.24
FDPS-208ENST00000470171 ZNF667Q5HYK9 610 aa16.53■□□□□ 0.24
FDPS-208ENST00000470171 PHLDB3Q6NSJ2 640 aa16.53■□□□□ 0.24
FDPS-208ENST00000470171 FAM200AQ8TCP9 573 aa16.53■□□□□ 0.24
FDPS-208ENST00000470171 DHTKD1Q96HY7 919 aaPredicted RBP16.53■□□□□ 0.24
FDPS-208ENST00000470171 TNIP3Q96KP6 325 aa16.53■□□□□ 0.24
FDPS-208ENST00000470171 SEPT5Q99719 369 aaPredicted RBP16.53■□□□□ 0.24
FDPS-208ENST00000470171 TRPV5Q9NQA5 729 aa16.53■□□□□ 0.24
FDPS-208ENST00000470171 ABI2Q9NYB9 513 aaPredicted RBP16.53■□□□□ 0.24
FDPS-208ENST00000470171 SLC27A5Q9Y2P5 690 aa16.53■□□□□ 0.24
FDPS-208ENST00000470171 PCDHA5Q9Y5H7 936 aa16.53■□□□□ 0.24
FDPS-208ENST00000470171 C5orf42Q9H799 3197 aa16.52■□□□□ 0.24
FDPS-208ENST00000470171 LRRIQ3A6PVS8 624 aaPredicted RBP16.52■□□□□ 0.24
FDPS-208ENST00000470171 PSMA7O14818 248 aa16.52■□□□□ 0.24
FDPS-208ENST00000470171 SLC16A3O15427 465 aaKnown RBP16.52■□□□□ 0.24
FDPS-208ENST00000470171 EPB41P11171 864 aaKnown RBP16.52■□□□□ 0.24
FDPS-208ENST00000470171 MYL4P12829 197 aa16.52■□□□□ 0.24
FDPS-208ENST00000470171 PFKLP17858 780 aa16.52■□□□□ 0.24
FDPS-208ENST00000470171 PPP3CCP48454 512 aa16.52■□□□□ 0.24
FDPS-208ENST00000470171 PDE6CP51160 858 aa16.52■□□□□ 0.24
FDPS-208ENST00000470171 PNOCQ13519 176 aa16.52■□□□□ 0.24
FDPS-208ENST00000470171 SLC5A9Q2M3M2 681 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms