RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 NELFCDQ8IXH7 590 aa20.86■□□□□ 0.93
USP40-207ENST00000450940 TOP6BLQ8N6T0 577 aa20.86■□□□□ 0.93
USP40-207ENST00000450940 XXYLT1Q8NBI6 393 aa20.86■□□□□ 0.93
USP40-207ENST00000450940 TMEM174Q8WUU8 243 aa20.86■□□□□ 0.93
USP40-207ENST00000450940 CHAMP1Q96JM3 812 aa20.86■□□□□ 0.93
USP40-207ENST00000450940 STK25O00506 426 aa20.85■□□□□ 0.93
USP40-207ENST00000450940 GABRDO14764 452 aa20.85■□□□□ 0.93
USP40-207ENST00000450940 CLIC2O15247 247 aa20.85■□□□□ 0.93
USP40-207ENST00000450940 SOAT2O75908 522 aa20.85■□□□□ 0.93
USP40-207ENST00000450940 FGF19O95750 216 aa20.85■□□□□ 0.93
USP40-207ENST00000450940 MYL1P05976 194 aa20.85■□□□□ 0.93
USP40-207ENST00000450940 ATF6P18850 670 aa20.85■□□□□ 0.93
USP40-207ENST00000450940 BFSP1Q12934 665 aa20.85■□□□□ 0.93
USP40-207ENST00000450940 SNW1Q13573 536 aaKnown RBP20.85■□□□□ 0.93
USP40-207ENST00000450940 PSMD6Q15008 389 aa20.85■□□□□ 0.93
USP40-207ENST00000450940 TEAD2Q15562 447 aa20.85■□□□□ 0.93
USP40-207ENST00000450940 MLF2Q15773 248 aaPredicted RBP20.85■□□□□ 0.93
USP40-207ENST00000450940 KNOP1Q1ED39 458 aaKnown RBP20.85■□□□□ 0.93
USP40-207ENST00000450940 LMBRD2Q68DH5 695 aaPredicted RBP20.85■□□□□ 0.93
USP40-207ENST00000450940 GAREM2Q75VX8 874 aa20.85■□□□□ 0.93
USP40-207ENST00000450940 ATOH1Q92858 354 aaPredicted RBP20.85■□□□□ 0.93
USP40-207ENST00000450940 PKMYT1Q99640 499 aa20.85■□□□□ 0.93
USP40-207ENST00000450940 ZNF334Q9HCZ1 680 aaPredicted RBP20.85■□□□□ 0.93
USP40-207ENST00000450940 TMLHEQ9NVH6 421 aa20.85■□□□□ 0.93
USP40-207ENST00000450940 SIT1Q9Y3P8 196 aa20.85■□□□□ 0.93
USP40-207ENST00000450940 ATP6V1DQ9Y5K8 247 aa20.85■□□□□ 0.93
USP40-207ENST00000450940 NUP210Q8TEM1 1887 aaPredicted RBP20.85■□□□□ 0.93
USP40-207ENST00000450940 COL4A2P08572 1712 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 A0A1W2PRU2 124 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 PROB1E7EW31 1015 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 TNNC2P02585 160 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 KRT19P08727 400 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 TSPY1Q01534 308 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 CYP24A1Q07973 514 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 MYO1EQ12965 1108 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 STK4Q13043 487 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 NFE2Q16621 373 aaPredicted RBP20.84■□□□□ 0.93
USP40-207ENST00000450940 SOWAHAQ2M3V2 549 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 MGAT5BQ3V5L5 792 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 PJA1Q8NG27 643 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 ZSCAN18Q8TBC5 510 aaPredicted RBP20.84■□□□□ 0.93
USP40-207ENST00000450940 DNASE1L2Q92874 299 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 E2F7Q96AV8 911 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 MKNK1Q9BUB5 465 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 OSBPL6Q9BZF3 934 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 SCAND2PQ9GZW5 306 aaPredicted RBP20.84■□□□□ 0.93
USP40-207ENST00000450940 GZF1Q9H116 711 aaPredicted RBP20.84■□□□□ 0.93
USP40-207ENST00000450940 TRPV5Q9NQA5 729 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 PCDHB5Q9Y5E4 795 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 SNX9Q9Y5X1 595 aa20.84■□□□□ 0.93
USP40-207ENST00000450940 COL4A3Q01955 1670 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.83■□□□□ 0.93
USP40-207ENST00000450940 A0A1W2PQ27 194 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 A0A1W2PQ64 194 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 A0A1W2PQD8 194 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 KANSL1LA0AUZ9 987 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 TULP1O00294 542 aaPredicted RBP20.83■□□□□ 0.93
USP40-207ENST00000450940 PRPF40AO75400 957 aaKnown RBP20.83■□□□□ 0.93
USP40-207ENST00000450940 PSMC3P17980 439 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 RFX1P22670 979 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 WEE1P30291 646 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 LHX1P48742 406 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 VITQ6UXI7 678 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 TRAPPC11Q7Z392 1133 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 OSTM1Q86WC4 334 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 RDH13Q8NBN7 331 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 KIAA0895Q8NCT3 520 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 GOLGA5Q8TBA6 731 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 DEPDC1BQ8WUY9 529 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 HPDLQ96IR7 371 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 SEPT5Q99719 369 aaPredicted RBP20.83■□□□□ 0.93
USP40-207ENST00000450940 LPIN3Q9BQK8 851 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 TRMT61BQ9BVS5 477 aaKnown RBP20.83■□□□□ 0.93
USP40-207ENST00000450940 IL21Q9HBE4 155 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 ABCB6Q9NP58 842 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 FAM86C1Q9NVL1 165 aa20.83■□□□□ 0.93
USP40-207ENST00000450940 DDX43Q9NXZ2 648 aaKnown RBP20.83■□□□□ 0.93
USP40-207ENST00000450940 NBL1P41271 181 aa20.82■□□□□ 0.92
USP40-207ENST00000450940 VIPR2P41587 438 aa20.82■□□□□ 0.92
USP40-207ENST00000450940 CYP2J2P51589 502 aa20.82■□□□□ 0.92
USP40-207ENST00000450940 MYL7Q01449 175 aa20.82■□□□□ 0.92
USP40-207ENST00000450940 VEPH1Q14D04 833 aa20.82■□□□□ 0.92
USP40-207ENST00000450940 KMT5BQ4FZB7 885 aa20.82■□□□□ 0.92
USP40-207ENST00000450940 INTS6LQ5JSJ4 861 aaKnown RBP20.82■□□□□ 0.92
USP40-207ENST00000450940 MFSD6LQ8IWD5 586 aa20.82■□□□□ 0.92
USP40-207ENST00000450940 ADGRF2Q8IZF7 708 aa20.82■□□□□ 0.92
USP40-207ENST00000450940 CGRRF1Q99675 332 aa20.82■□□□□ 0.92
USP40-207ENST00000450940 FOXQ1Q9C009 403 aa20.82■□□□□ 0.92
USP40-207ENST00000450940 DMAC2Q9NW81 257 aa20.82■□□□□ 0.92
USP40-207ENST00000450940 ABI2Q9NYB9 513 aaPredicted RBP20.82■□□□□ 0.92
USP40-207ENST00000450940 R3HCC1Q9Y3T6 440 aaKnown RBP20.82■□□□□ 0.92
USP40-207ENST00000450940 OBSL1O75147 1896 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 SHISA7A6NL88 538 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 FAM163BP0C2L3 166 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 GLULP15104 373 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 GABRR2P28476 465 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 PCSK1P29120 753 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 SYKP43405 635 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 NDUFA8P51970 172 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 ANGPT1Q15389 498 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms