RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 SCAPQ12770 1279 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 SP140Q13342 867 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 TMCO3Q6UWJ1 677 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 TMC5Q6UXY8 1006 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 TMTC3Q6ZXV5 915 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 B4GALNT4Q76KP1 1039 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 KRT74Q7RTS7 529 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 ZNF572Q7Z3I7 529 aaPredicted RBP5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 CLEC14AQ86T13 490 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 WFDC3Q8IUB2 231 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 NGEFQ8N5V2 710 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 SLC15A4Q8N697 577 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 CSGALNACT1Q8TDX6 532 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 STON2Q8WXE9 905 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 REEP2Q9BRK0 252 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 ABHD16BQ9H3Z7 469 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 CFAP97Q9P2B7 532 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 ARHGAP20Q9P2F6 1191 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 CNPY2Q9Y2B0 182 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 PLEKHM1Q9Y4G2 1056 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 RSF1Q96T23 1441 aaPredicted RBP5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 B4DLN1 442 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 DNPH1O43598 174 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 DKC1O60832 514 aaKnown RBP eCLIP5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 SLC43A1O75387 559 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 HPXP02790 462 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 ADRB2P07550 413 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 RXRAP19793 462 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 CD96P40200 585 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 ARL4AP40617 200 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 UBA7P41226 1012 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 ALDH1A3P47895 512 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 HK2P52789 917 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 NKX3-2P78367 333 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 CUL4AQ13619 759 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 NR1I3Q14994 352 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 NPY5RQ15761 445 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 BAK1Q16611 211 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 TTC22Q5TAA0 569 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 SNX30Q5VWJ9 437 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 ATG16L1Q676U5 607 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 PLAG1Q6DJT9 500 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 MRNIPQ6NTE8 343 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 ZDHHC24Q6UX98 284 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 IRF2BP1Q8IU81 584 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 TMEM57Q8N5G2 664 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 PCSK9Q8NBP7 692 aaKnown RBP5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 CEP70Q8NHQ1 597 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 SSH3Q8TE77 659 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 TBC1D22AQ8WUA7 517 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 MISP3Q96FF7 219 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 TIGD1Q96MW7 591 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 TRAPPC9Q96Q05 1148 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 TACO1Q9BSH4 297 aaKnown RBP5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 ARHGAP39Q9C0H5 1083 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 BCAS3Q9H6U6 928 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 GPR35Q9HC97 309 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 SLAMF7Q9NQ25 335 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 PIM2Q9P1W9 311 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 DKK4Q9UBT3 224 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 ZFP69BQ9UJL9 534 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 ZNF112Q9UJU3 913 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 VPS28Q9UK41 221 aa5.94□□□□□ -1.46
TM9SF3-202ENST00000443638 A0A0G2JNJ9 132 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 FAM90A18PA6NE21 464 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 FAM90A16PA6NEW6 464 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 PRR19A6NJB7 356 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 FAM90A9PA6NNJ1 464 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 FAM90A5PA8MXJ8 464 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 TEX33O43247 280 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 DHHO43323 396 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 USP1O94782 785 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 ALDH1A2O94788 518 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 SCGB1D1O95968 90 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 SLC3A2P08195 630 aaKnown RBP5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 GNAI3P08754 354 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 FAM90A15PP0C7V4 464 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 FAM90A14PP0C7W9 464 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 MTHFD1P11586 935 aaKnown RBP5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 MAPK4P31152 587 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 SLC5A2P31639 672 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 SLC6A4P31645 630 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 CCR9P51686 369 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 BCAT1P54687 386 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 GNAI1P63096 354 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 ZP2Q05996 745 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 SMAD1Q15797 465 aaKnown RBP5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 CFAP58Q5T655 872 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 KIAA1614Q5VZ46 1190 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 OTUD7BQ6GQQ9 843 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 DPP8Q6V1X1 898 aaPredicted RBP5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 RPTNQ6XPR3 784 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 GET4Q7L5D6 327 aaPredicted RBP5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 PDSS2Q86YH6 399 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 CREBRFQ8IUR6 639 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 MPP5Q8N3R9 675 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 FBXO18Q8NFZ0 1043 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 RNF125Q96EQ8 232 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 MED15Q96RN5 788 aa5.93□□□□□ -1.46
TM9SF3-202ENST00000443638 TMEM209Q96SK2 561 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms