RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 ITGA11Q9UKX5 1188 aa19.88■□□□□ 0.77
NUP50-207ENST00000424634 RIF1Q5UIP0 2472 aaKnown RBP19.88■□□□□ 0.77
NUP50-207ENST00000424634 CFAP54Q96N23 3096 aa19.87■□□□□ 0.77
NUP50-207ENST00000424634 CLIC2O15247 247 aa19.87■□□□□ 0.77
NUP50-207ENST00000424634 KRT19P08727 400 aa19.87■□□□□ 0.77
NUP50-207ENST00000424634 HAPLN1P10915 354 aaPredicted RBP19.87■□□□□ 0.77
NUP50-207ENST00000424634 RBP5P82980 135 aa19.87■□□□□ 0.77
NUP50-207ENST00000424634 BFSP1Q12934 665 aa19.87■□□□□ 0.77
NUP50-207ENST00000424634 MGAT5BQ3V5L5 792 aa19.87■□□□□ 0.77
NUP50-207ENST00000424634 FRMD5Q7Z6J6 570 aa19.87■□□□□ 0.77
NUP50-207ENST00000424634 OSTM1Q86WC4 334 aa19.87■□□□□ 0.77
NUP50-207ENST00000424634 NELFCDQ8IXH7 590 aa19.87■□□□□ 0.77
NUP50-207ENST00000424634 TRMT61BQ9BVS5 477 aaKnown RBP19.87■□□□□ 0.77
NUP50-207ENST00000424634 GPR88Q9GZN0 384 aa19.87■□□□□ 0.77
NUP50-207ENST00000424634 SLC39A2Q9NP94 309 aa19.87■□□□□ 0.77
NUP50-207ENST00000424634 AGPAT3Q9NRZ7 376 aa19.87■□□□□ 0.77
NUP50-207ENST00000424634 GDAP2Q9NXN4 497 aa19.87■□□□□ 0.77
NUP50-207ENST00000424634 SERTAD1Q9UHV2 236 aa19.87■□□□□ 0.77
NUP50-207ENST00000424634 COL4A2P08572 1712 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 PVALEFA0A1B0GWK0 134 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 FAM170BA6NMN3 283 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 GFRA3O60609 400 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 TMEM191BP0C7N4 346 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 PSMC3P17980 439 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 GABRR2P28476 465 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 TPRG1Q6ZUI0 275 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 ASCL5Q7RTU5 278 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 DCP1BQ8IZD4 617 aaKnown RBP19.86■□□□□ 0.77
NUP50-207ENST00000424634 RDH13Q8NBN7 331 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 SPPL2BQ8TCT7 592 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 GIPC2Q8TF65 315 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 C2orf15Q8WU43 125 aaKnown RBP19.86■□□□□ 0.77
NUP50-207ENST00000424634 ATXN3LQ9H3M9 355 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 SLITRK6Q9H5Y7 841 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 BRD9Q9H8M2 597 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 IL21Q9HBE4 155 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 LTB4R2Q9NPC1 389 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 ABI2Q9NYB9 513 aaPredicted RBP19.86■□□□□ 0.77
NUP50-207ENST00000424634 SNX9Q9Y5X1 595 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 PTPRZ1P23471 2315 aaPredicted RBP19.86■□□□□ 0.77
NUP50-207ENST00000424634 TICRRQ7Z2Z1 1910 aa19.86■□□□□ 0.77
NUP50-207ENST00000424634 DENND4CQ5VZ89 1909 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 HEPACAM2A8MVW5 462 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 HCRTO43612 131 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 ACTN4O43707 911 aaKnown RBP19.85■□□□□ 0.77
NUP50-207ENST00000424634 KLRC4O43908 158 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 HUS1O60921 280 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 ACAT1P24752 427 aaKnown RBP19.85■□□□□ 0.77
NUP50-207ENST00000424634 GDI1P31150 447 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 SMARCB1Q12824 385 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 FZD5Q13467 585 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 UBXN2BQ14CS0 331 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 DUOXA2Q1HG44 320 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 SOWAHAQ2M3V2 549 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 ITIH5Q86UX2 942 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 MFSD6LQ8IWD5 586 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 FAM200AQ8TCP9 573 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 LEO1Q8WVC0 666 aaPredicted RBP19.85■□□□□ 0.77
NUP50-207ENST00000424634 DNASE1L2Q92874 299 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 ANKRD36BP1Q96IX9 119 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 LRRC3BQ96PB8 259 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 PKMYT1Q99640 499 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 ACBD6Q9BR61 282 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 KIAA1586Q9HCI6 787 aa19.85■□□□□ 0.77
NUP50-207ENST00000424634 DDX43Q9NXZ2 648 aaKnown RBP19.85■□□□□ 0.77
NUP50-207ENST00000424634 A0A1B0GVL5 298 aa19.84■□□□□ 0.77
NUP50-207ENST00000424634 GABRDO14764 452 aa19.84■□□□□ 0.77
NUP50-207ENST00000424634 SLFN14P0C7P3 912 aa19.84■□□□□ 0.77
NUP50-207ENST00000424634 TARSP26639 723 aaKnown RBP19.84■□□□□ 0.77
NUP50-207ENST00000424634 GPR15P49685 360 aa19.84■□□□□ 0.77
NUP50-207ENST00000424634 CYP2J2P51589 502 aa19.84■□□□□ 0.77
NUP50-207ENST00000424634 SURF1Q15526 300 aa19.84■□□□□ 0.77
NUP50-207ENST00000424634 SNRNP35Q16560 246 aaKnown RBP19.84■□□□□ 0.77
NUP50-207ENST00000424634 CCDC142Q17RM4 750 aa19.84■□□□□ 0.77
NUP50-207ENST00000424634 BMT2Q1RMZ1 405 aa19.84■□□□□ 0.77
NUP50-207ENST00000424634 LIMS2Q7Z4I7 341 aa19.84■□□□□ 0.77
NUP50-207ENST00000424634 ARID3BQ8IVW6 561 aaPredicted RBP19.84■□□□□ 0.77
NUP50-207ENST00000424634 C1orf210Q8IVY1 113 aa19.84■□□□□ 0.77
NUP50-207ENST00000424634 MAML2Q8IZL2 1156 aaPredicted RBP19.84■□□□□ 0.77
NUP50-207ENST00000424634 TMEM86AQ8N2M4 240 aa19.84■□□□□ 0.77
NUP50-207ENST00000424634 PAGE5Q96GU1 130 aa19.84■□□□□ 0.77
NUP50-207ENST00000424634 PI4K2AQ9BTU6 479 aa19.84■□□□□ 0.77
NUP50-207ENST00000424634 OSBPL6Q9BZF3 934 aa19.84■□□□□ 0.77
NUP50-207ENST00000424634 GZF1Q9H116 711 aaPredicted RBP19.84■□□□□ 0.77
NUP50-207ENST00000424634 PCDHB5Q9Y5E4 795 aa19.84■□□□□ 0.77
NUP50-207ENST00000424634 UBE4BO95155 1302 aa19.83■□□□□ 0.77
NUP50-207ENST00000424634 ARNTLO00327 626 aa19.83■□□□□ 0.77
NUP50-207ENST00000424634 CST3P01034 146 aaPredicted RBP19.83■□□□□ 0.77
NUP50-207ENST00000424634 TNNC2P02585 160 aa19.83■□□□□ 0.77
NUP50-207ENST00000424634 HMGA1P17096 107 aaKnown RBP19.83■□□□□ 0.77
NUP50-207ENST00000424634 CMA1P23946 247 aa19.83■□□□□ 0.77
NUP50-207ENST00000424634 CYP4F8P98187 520 aa19.83■□□□□ 0.77
NUP50-207ENST00000424634 TSPY1Q01534 308 aa19.83■□□□□ 0.77
NUP50-207ENST00000424634 INTS6LQ5JSJ4 861 aaKnown RBP19.83■□□□□ 0.77
NUP50-207ENST00000424634 GPR158Q5T848 1215 aa19.83■□□□□ 0.77
NUP50-207ENST00000424634 TRAPPC11Q7Z392 1133 aa19.83■□□□□ 0.77
NUP50-207ENST00000424634 TMEM150AQ86TG1 271 aa19.83■□□□□ 0.77
NUP50-207ENST00000424634 WDR49Q8IV35 697 aa19.83■□□□□ 0.77
NUP50-207ENST00000424634 CEP57L1Q8IYX8 460 aa19.83■□□□□ 0.77
NUP50-207ENST00000424634 ZNF687Q8N1G0 1237 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms