RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 LMCD1Q9NZU5 365 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 SENP1Q9P0U3 644 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 PDP2Q9P2J9 529 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 PPM1HQ9ULR3 514 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 LAMB2P55268 1798 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 PLIN4Q96Q06 1357 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 CIB2O75838 187 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 PROSCO94903 275 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 ABHD2P08910 425 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 ADSSP30520 456 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 DEUP1Q05D60 604 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 RBM15BQ8NDT2 890 aaKnown RBP17.49■□□□□ 0.39
PKP4-204ENST00000421462 USP6NLQ92738 828 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 OXNAD1Q96HP4 312 aaPredicted RBP17.49■□□□□ 0.39
PKP4-204ENST00000421462 TIPINQ9BVW5 301 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 EBF3Q9H4W6 596 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 TMEM206Q9H813 350 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 SERPINA10Q9UK55 444 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 CHMP2BQ9UQN3 213 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 DDTLA6NHG4 134 aaPredicted RBP17.49■□□□□ 0.39
PKP4-204ENST00000421462 IPO5O00410 1097 aaKnown RBP17.49■□□□□ 0.39
PKP4-204ENST00000421462 LIASO43766 372 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 RNASEH1O60930 286 aaKnown RBP17.49■□□□□ 0.39
PKP4-204ENST00000421462 SLC1A1P43005 524 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 CMPK2Q5EBM0 449 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 FNBP1LQ5T0N5 605 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 TXNRD3NBQ6F5E7 133 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 RGS9BPQ6ZS82 235 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 SLC9A9Q8IVB4 645 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 EFCAB3Q8N7B9 438 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 CCDC110Q8TBZ0 833 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 MKL1Q969V6 931 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 CLIC5Q9NZA1 410 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 ANGPTL2Q9UKU9 493 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 STK24Q9Y6E0 443 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 IKBKGQ9Y6K9 419 aa17.49■□□□□ 0.39
PKP4-204ENST00000421462 CREB3O43889 395 aa17.48■□□□□ 0.39
PKP4-204ENST00000421462 DSG3P32926 999 aa17.48■□□□□ 0.39
PKP4-204ENST00000421462 CIITAP33076 1130 aa17.48■□□□□ 0.39
PKP4-204ENST00000421462 EPHB1P54762 984 aa17.48■□□□□ 0.39
PKP4-204ENST00000421462 DYNC1I2Q13409 638 aaKnown RBP17.48■□□□□ 0.39
PKP4-204ENST00000421462 C6orf163Q5TEZ5 329 aa17.48■□□□□ 0.39
PKP4-204ENST00000421462 SV2AQ7L0J3 742 aa17.48■□□□□ 0.39
PKP4-204ENST00000421462 MIER3Q7Z3K6 550 aa17.48■□□□□ 0.39
PKP4-204ENST00000421462 TREML1Q86YW5 311 aa17.48■□□□□ 0.39
PKP4-204ENST00000421462 FBXO36Q8NEA4 188 aa17.48■□□□□ 0.39
PKP4-204ENST00000421462 KCNK13Q9HB14 408 aa17.48■□□□□ 0.39
PKP4-204ENST00000421462 IL1R1P14778 569 aa17.48■□□□□ 0.39
PKP4-204ENST00000421462 ARID3BQ8IVW6 561 aaPredicted RBP17.48■□□□□ 0.39
PKP4-204ENST00000421462 CTAGE3PQ8IX95 158 aa17.48■□□□□ 0.39
PKP4-204ENST00000421462 FAM163AQ96GL9 167 aaPredicted RBP17.48■□□□□ 0.39
PKP4-204ENST00000421462 DNAJC1Q96KC8 554 aaKnown RBP17.48■□□□□ 0.39
PKP4-204ENST00000421462 IQCGQ9H095 443 aaKnown RBP17.48■□□□□ 0.39
PKP4-204ENST00000421462 RHBDL2Q9NX52 303 aa17.48■□□□□ 0.39
PKP4-204ENST00000421462 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.48■□□□□ 0.39
PKP4-204ENST00000421462 ZNF212Q9UDV6 495 aa17.48■□□□□ 0.39
PKP4-204ENST00000421462 RABGEF1Q9UJ41 708 aa17.48■□□□□ 0.39
PKP4-204ENST00000421462 CLUHO75153 1309 aa17.48■□□□□ 0.39
PKP4-204ENST00000421462 ATRNL1Q5VV63 1379 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 OR6B1O95007 311 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 SMTNL2Q2TAL5 461 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.47■□□□□ 0.39
PKP4-204ENST00000421462 LPCAT4Q643R3 524 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 PLA2G4FQ68DD2 849 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 RAPH1Q70E73 1250 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 RASSF3Q86WH2 238 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 SCUBE1Q8IWY4 988 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 OPTNQ96CV9 577 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 PANX3Q96QZ0 392 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 SPATA16Q9BXB7 569 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 SLC13A1Q9BZW2 595 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 DMAP1Q9NPF5 467 aaPredicted RBP17.47■□□□□ 0.39
PKP4-204ENST00000421462 ETNK2Q9NVF9 386 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 NHSQ6T4R5 1651 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 PGM3O95394 542 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 CEP55Q53EZ4 464 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 SIAH1Q8IUQ4 282 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 APLFQ8IW19 511 aaPredicted RBP17.47■□□□□ 0.39
PKP4-204ENST00000421462 DCAF4Q8WV16 495 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 ECSITQ9BQ95 431 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 RANBP17Q9H2T7 1088 aaKnown RBP17.47■□□□□ 0.39
PKP4-204ENST00000421462 VCX3BQ9H321 246 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 VCX3AQ9NNX9 186 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 IVNS1ABPQ9Y6Y0 642 aa17.47■□□□□ 0.39
PKP4-204ENST00000421462 FAM155BO75949 473 aa17.46■□□□□ 0.39
PKP4-204ENST00000421462 RARBP10826 455 aa17.46■□□□□ 0.39
PKP4-204ENST00000421462 ATP2B4P23634 1241 aa17.46■□□□□ 0.39
PKP4-204ENST00000421462 BASP1P80723 227 aaKnown RBP17.46■□□□□ 0.39
PKP4-204ENST00000421462 PRPF39Q86UA1 669 aaKnown RBP17.46■□□□□ 0.39
PKP4-204ENST00000421462 ARHGAP24Q8N264 748 aa17.46■□□□□ 0.39
PKP4-204ENST00000421462 GSTCDQ8NEC7 633 aa17.46■□□□□ 0.39
PKP4-204ENST00000421462 TEKT3Q9BXF9 490 aa17.46■□□□□ 0.39
PKP4-204ENST00000421462 PREBQ9HCU5 417 aa17.46■□□□□ 0.39
PKP4-204ENST00000421462 PRR12Q9ULL5 1215 aa17.46■□□□□ 0.39
PKP4-204ENST00000421462 UMODL1Q5DID0 1318 aa17.46■□□□□ 0.39
PKP4-204ENST00000421462 TCRBV7S3A2A0A539 114 aa17.46■□□□□ 0.39
PKP4-204ENST00000421462 UNGP13051 313 aaPredicted RBP17.46■□□□□ 0.39
PKP4-204ENST00000421462 LIN52Q52LA3 116 aa17.46■□□□□ 0.39
PKP4-204ENST00000421462 TMEM270Q6UE05 265 aa17.46■□□□□ 0.39
PKP4-204ENST00000421462 SMC1BQ8NDV3 1235 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms