RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 CYP51A1Q16850 503 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 TRIM65Q6PJ69 517 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 RNF180Q86T96 592 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 LINC00301Q8NCQ3 95 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 RPRD1AQ96P16 312 aaPredicted RBP19.26■□□□□ 0.67
SHANK3-202ENST00000414786 SETD3Q86TU7 594 aaPredicted RBP19.26■□□□□ 0.67
SHANK3-202ENST00000414786 KLHL1Q9NR64 748 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 MINPP1Q9UNW1 487 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 SCAMP3O14828 347 aaKnown RBP19.26■□□□□ 0.67
SHANK3-202ENST00000414786 TRPC4APQ8TEL6 797 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 MTFMTQ96DP5 389 aaKnown RBP19.26■□□□□ 0.67
SHANK3-202ENST00000414786 EVPLLA8MZ36 301 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 CIAO1O76071 339 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 GH1P01241 217 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 VSNL1P62760 191 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 TRMT11Q7Z4G4 463 aaKnown RBP19.25■□□□□ 0.67
SHANK3-202ENST00000414786 SLITRK1Q96PX8 696 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 SPRTNQ9H040 489 aaPredicted RBP19.25■□□□□ 0.67
SHANK3-202ENST00000414786 AMACRQ9UHK6 382 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 MARSP56192 900 aaKnown RBP19.25■□□□□ 0.67
SHANK3-202ENST00000414786 TYW3Q6IPR3 259 aaKnown RBP19.25■□□□□ 0.67
SHANK3-202ENST00000414786 DHX40Q8IX18 779 aaKnown RBP19.25■□□□□ 0.67
SHANK3-202ENST00000414786 PARK7Q99497 189 aaKnown RBP19.25■□□□□ 0.67
SHANK3-202ENST00000414786 SYBUQ9NX95 663 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 ZNF185O15231 689 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 LPIN1Q14693 890 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 SAMD7Q7Z3H4 446 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 GUCY1A3Q02108 690 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 MROH9Q5TGP6 573 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 PPP4R3CPQ6ZMV5 832 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 MTSS1LQ765P7 747 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 DNAJC1Q96KC8 554 aaKnown RBP19.25■□□□□ 0.67
SHANK3-202ENST00000414786 RPRD1BQ9NQG5 326 aaKnown RBP19.25■□□□□ 0.67
SHANK3-202ENST00000414786 PIPSLA2A3N6 862 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 CLCN6P51797 869 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 KCNK10P57789 538 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 MAPRE2Q15555 327 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 EML3Q32P44 896 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 TMC7Q7Z402 723 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 RELTQ969Z4 430 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 ALKBH4Q9NXW9 302 aa19.25■□□□□ 0.67
SHANK3-202ENST00000414786 GLRBP48167 497 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 MICU2Q8IYU8 434 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 PCDHA10Q9Y5I2 948 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 TAF5Q15542 800 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 ADI1Q9BV57 179 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 TMEM94Q12767 1356 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 SFNP31947 248 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 TBC1D10CQ8IV04 446 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 FAR2Q96K12 515 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 DGKKQ5KSL6 1271 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 SNAP47Q5SQN1 464 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 LONP2Q86WA8 852 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 SH3GL2Q99962 352 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 INTS13Q9NVM9 706 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 SPATA2Q9UM82 520 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 ZNF682O95780 498 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 NCOA4Q13772 614 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 CCNIQ14094 377 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 AAASQ9NRG9 546 aa19.24■□□□□ 0.67
SHANK3-202ENST00000414786 RBP5P82980 135 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 ZSCAN18Q8TBC5 510 aaPredicted RBP19.23■□□□□ 0.67
SHANK3-202ENST00000414786 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.23■□□□□ 0.67
SHANK3-202ENST00000414786 LRRIQ3A6PVS8 624 aaPredicted RBP19.23■□□□□ 0.67
SHANK3-202ENST00000414786 SIK3Q9Y2K2 1263 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 ENO4A6NNW6 628 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 hCG_1984214I3L0E3 225 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 MSH4O15457 936 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 KCNQ2O43526 872 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 KATNA1O75449 491 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 ZNF713Q8N859 430 aaPredicted RBP19.23■□□□□ 0.67
SHANK3-202ENST00000414786 CYP39A1Q9NYL5 469 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 TRMT6Q9UJA5 497 aaKnown RBP19.23■□□□□ 0.67
SHANK3-202ENST00000414786 FAM25AB3EWG3 89 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 FAM25CB3EWG5 89 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 FAM25GB3EWG6 89 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 GPRASP2Q96D09 838 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 NUDT12Q9BQG2 462 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 HDHD2Q9H0R4 259 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 CATSPERBQ9H7T0 1116 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 IPPQ9Y573 584 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 PDZK1P1A8MUH7 402 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 VTNP04004 478 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 PPP1R13LQ8WUF5 828 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 KLRC2P26717 231 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 IZUMO1Q8IYV9 350 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 CNDP1Q96KN2 507 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 MED15Q96RN5 788 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 TRIM51Q9BSJ1 452 aa19.23■□□□□ 0.67
SHANK3-202ENST00000414786 CASTOR2A6NHX0 329 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 FCGRTP55899 365 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 CBFBQ13951 182 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 ABHD10Q9NUJ1 306 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 VWA5AO00534 786 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 STX7O15400 261 aaKnown RBP19.22■□□□□ 0.67
SHANK3-202ENST00000414786 DENND5BQ6ZUT9 1274 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 DSG4Q86SJ6 1040 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 ELL3Q9HB65 397 aaPredicted RBP19.22■□□□□ 0.67
SHANK3-202ENST00000414786 MFAP3LO75121 409 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 HLA-DQA1Q5Y7H0 255 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms