RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 GRK7Q8WTQ7 553 aa14.11□□□□□ -0.15
COL6A2-204ENST00000409416 SPOCK2Q92563 424 aa14.11□□□□□ -0.15
COL6A2-204ENST00000409416 RBM15Q96T37 977 aaKnown RBP eCLIP14.11□□□□□ -0.15
COL6A2-204ENST00000409416 PITPNM3Q9BZ71 974 aa14.11□□□□□ -0.15
COL6A2-204ENST00000409416 APOBEC3GQ9HC16 384 aaKnown RBP14.11□□□□□ -0.15
COL6A2-204ENST00000409416 NINJ2Q9NZG7 142 aa14.11□□□□□ -0.15
COL6A2-204ENST00000409416 DNPEPQ9ULA0 475 aa14.11□□□□□ -0.15
COL6A2-204ENST00000409416 P4HA2O15460 535 aa14.11□□□□□ -0.15
COL6A2-204ENST00000409416 HCRTO43612 131 aa14.11□□□□□ -0.15
COL6A2-204ENST00000409416 SNX3O60493 162 aa14.11□□□□□ -0.15
COL6A2-204ENST00000409416 SUPT20HL2P0C7V6 817 aa14.11□□□□□ -0.15
COL6A2-204ENST00000409416 ITIH2P19823 946 aa14.11□□□□□ -0.15
COL6A2-204ENST00000409416 CUL2Q13617 745 aa14.11□□□□□ -0.15
COL6A2-204ENST00000409416 SUPT20HL1Q3ZLR7 823 aa14.11□□□□□ -0.15
COL6A2-204ENST00000409416 AGR3Q8TD06 166 aa14.11□□□□□ -0.15
COL6A2-204ENST00000409416 METTL5Q9NRN9 209 aaKnown RBP14.11□□□□□ -0.15
COL6A2-204ENST00000409416 NAALADL1Q9UQQ1 740 aa14.11□□□□□ -0.15
COL6A2-204ENST00000409416 SNX9Q9Y5X1 595 aa14.11□□□□□ -0.15
COL6A2-204ENST00000409416 SRRM3A6NNA2 597 aaPredicted RBP14.1□□□□□ -0.15
COL6A2-204ENST00000409416 ASAP2O43150 1006 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 KRT81Q14533 505 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 NPNTQ6UXI9 565 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 FAM228AQ86W67 206 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 ATL2Q8NHH9 583 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 ZNF606Q8WXB4 792 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 NDRG1Q92597 394 aaKnown RBP14.1□□□□□ -0.15
COL6A2-204ENST00000409416 CAMKK2Q96RR4 588 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 DCLK3Q9C098 648 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 MARCOQ9UEW3 520 aaPredicted RBP14.1□□□□□ -0.15
COL6A2-204ENST00000409416 BHMG1C9JSJ3 638 aaPredicted RBP14.1□□□□□ -0.15
COL6A2-204ENST00000409416 CST8O60676 142 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 CTSHP09668 335 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 KCNA3P22001 575 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 HSD17B4P51659 736 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 MMRN1Q13201 1228 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 MPP2Q14168 576 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 SIX1Q15475 284 aaPredicted RBP14.1□□□□□ -0.15
COL6A2-204ENST00000409416 ZNF354CQ86Y25 554 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 FAM71DQ8N9W8 422 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 CD101Q93033 1021 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 GMLQ99445 158 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 TRAIPQ9BWF2 469 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 AAASQ9NRG9 546 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 CISHQ9NSE2 258 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 CHMP2BQ9UQN3 213 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 INPP5FQ9Y2H2 1132 aa14.1□□□□□ -0.15
COL6A2-204ENST00000409416 CAPSQ13938 189 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 ZNF667Q5HYK9 610 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 HHATQ5VTY9 493 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 DARS2Q6PI48 645 aaKnown RBP14.09□□□□□ -0.15
COL6A2-204ENST00000409416 FAM83AQ86UY5 434 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 HACE1Q8IYU2 909 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 CENPTQ96BT3 561 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 RPF1Q9H9Y2 349 aaKnown RBP14.09□□□□□ -0.15
COL6A2-204ENST00000409416 ARIH2O95376 493 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 CETPP11597 493 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 LCP1P13796 627 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 AKAP5P24588 427 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 SSTR1P30872 391 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 SLC8A1P32418 973 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 C15orf59Q2T9L4 293 aaPredicted RBP14.09□□□□□ -0.15
COL6A2-204ENST00000409416 RAB6CQ53S08 254 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 SH3PXD2AQ5TCZ1 1133 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 SLC13A1Q9BZW2 595 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 RAB6CQ9H0N0 254 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 ASCC2Q9H1I8 757 aaPredicted RBP14.09□□□□□ -0.15
COL6A2-204ENST00000409416 ZNF214Q9UL59 606 aaPredicted RBP14.09□□□□□ -0.15
COL6A2-204ENST00000409416 MYO7AQ13402 2215 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 EDN1P05305 212 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 POLR2BP30876 1174 aaKnown RBP14.09□□□□□ -0.15
COL6A2-204ENST00000409416 ELF1P32519 619 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 ALDH5A1P51649 535 aaPredicted RBP14.09□□□□□ -0.15
COL6A2-204ENST00000409416 GPC3P51654 580 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 KCTD17Q8N5Z5 321 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 MORC4Q8TE76 937 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 TTC17Q96AE7 1141 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 PPP1R36Q96LQ0 422 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 STRA6Q9BX79 667 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 LRRC19Q9H756 370 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 ETNK1Q9HBU6 452 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 PCDHB2Q9Y5E7 798 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 TIMM13Q9Y5L4 95 aaPredicted RBP14.09□□□□□ -0.15
COL6A2-204ENST00000409416 MROH7Q68CQ1 1323 aa14.09□□□□□ -0.15
COL6A2-204ENST00000409416 CD48P09326 243 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 XRCC4Q13426 336 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 VSTM1Q6UX27 236 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 ARHGEF18Q6ZSZ5 1173 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 NME8Q8N427 588 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 SLC17A8Q8NDX2 589 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 RMDN2Q96LZ7 410 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 TEPSINQ96N21 525 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 SMYD3Q9H7B4 428 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 FSCN2O14926 492 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 KRT3P12035 628 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 KCNA2P16389 499 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 MAGEA4P43358 317 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 CDH6P55285 790 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 MYBPC2Q14324 1141 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 ITIH4Q14624 930 aa14.08□□□□□ -0.16
COL6A2-204ENST00000409416 TRIM68Q6AZZ1 485 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms