RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 NIF3L1Q9GZT8 377 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 ECT2Q9H8V3 914 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 HOXC10Q9NYD6 342 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 NKIRAS1Q9NYS0 192 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 TJP2Q9UDY2 1190 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 GRID1Q9ULK0 1009 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 AFG3L2Q9Y4W6 797 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 GJA3Q9Y6H8 435 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 POLR2AP24928 1970 aaKnown RBP11.53□□□□□ -0.56
BEST1-201ENST00000378043 LRRD1A4D1F6 860 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 CFAP73A6NFT4 308 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 MAFO75444 373 aaPredicted RBP11.53□□□□□ -0.56
BEST1-201ENST00000378043 BANF1O75531 89 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 TOM1L1O75674 476 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 CETN2P41208 172 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 ALDH5A1P51649 535 aaPredicted RBP11.53□□□□□ -0.56
BEST1-201ENST00000378043 COPS2P61201 443 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 GAD2Q05329 585 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 MKRN3Q13064 507 aaKnown RBP11.53□□□□□ -0.56
BEST1-201ENST00000378043 ZNF268Q14587 947 aaPredicted RBP11.53□□□□□ -0.56
BEST1-201ENST00000378043 MORF4L2Q15014 288 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 PKN2Q16513 984 aaKnown RBP11.53□□□□□ -0.56
BEST1-201ENST00000378043 ANGEL2Q5VTE6 544 aaKnown RBP11.53□□□□□ -0.56
BEST1-201ENST00000378043 CCDC91Q7Z6B0 441 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 PNMA8AQ86V59 439 aaPredicted RBP11.53□□□□□ -0.56
BEST1-201ENST00000378043 CEP57Q86XR8 500 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 TDRPQ86YL5 185 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 KIAA0319LQ8IZA0 1049 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 ANKRD35Q8N283 1001 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 NIPA2Q8N8Q9 360 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 TMEM35BQ8NCS4 154 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 SLC35B2Q8TB61 432 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 CCHCR1Q8TD31 782 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 SPOCK2Q92563 424 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 ACO2Q99798 780 aaKnown RBP11.53□□□□□ -0.56
BEST1-201ENST00000378043 XYLT2Q9H1B5 865 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 YY1AP1Q9H869 796 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 CYTH4Q9UIA0 394 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 PTPRFP10586 1907 aa11.53□□□□□ -0.56
BEST1-201ENST00000378043 POC1B-GALNT4F8VUJ3 575 aa11.52□□□□□ -0.56
BEST1-201ENST00000378043 ALOX15BO15296 676 aa11.52□□□□□ -0.56
BEST1-201ENST00000378043 ITGAVP06756 1048 aa11.52□□□□□ -0.56
BEST1-201ENST00000378043 NQO1P15559 274 aaKnown RBP11.52□□□□□ -0.56
BEST1-201ENST00000378043 RFC1P35251 1148 aaPredicted RBP11.52□□□□□ -0.56
BEST1-201ENST00000378043 ASPAP45381 313 aa11.52□□□□□ -0.56
BEST1-201ENST00000378043 STAT5BP51692 787 aa11.52□□□□□ -0.56
BEST1-201ENST00000378043 GRM1Q13255 1194 aa11.52□□□□□ -0.56
BEST1-201ENST00000378043 RIPK1Q13546 671 aa11.52□□□□□ -0.56
BEST1-201ENST00000378043 PIGHQ14442 188 aaPredicted RBP11.52□□□□□ -0.56
BEST1-201ENST00000378043 DALRD3Q5D0E6 543 aaKnown RBP11.52□□□□□ -0.56
BEST1-201ENST00000378043 PPP1R21Q6ZMI0 780 aa11.52□□□□□ -0.56
BEST1-201ENST00000378043 CAPN12Q6ZSI9 719 aa11.52□□□□□ -0.56
BEST1-201ENST00000378043 ECHDC2Q86YB7 292 aa11.52□□□□□ -0.56
BEST1-201ENST00000378043 PRCCQ92733 491 aaPredicted RBP11.52□□□□□ -0.56
BEST1-201ENST00000378043 TCHPQ9BT92 498 aa11.52□□□□□ -0.56
BEST1-201ENST00000378043 C10orf88Q9H8K7 445 aa11.52□□□□□ -0.56
BEST1-201ENST00000378043 RXFP1Q9HBX9 757 aa11.52□□□□□ -0.56
BEST1-201ENST00000378043 BAIAP2L1Q9UHR4 511 aa11.52□□□□□ -0.56
BEST1-201ENST00000378043 CPSF3Q9UKF6 684 aaKnown RBP11.52□□□□□ -0.56
BEST1-201ENST00000378043 SSC5DA1L4H1 1573 aa11.52□□□□□ -0.56
BEST1-201ENST00000378043 HOXC6P09630 235 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 EIF4BP23588 611 aaKnown RBP11.52□□□□□ -0.57
BEST1-201ENST00000378043 IL1R2P27930 398 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 RDXP35241 583 aaKnown RBP11.52□□□□□ -0.57
BEST1-201ENST00000378043 AP3M2P53677 418 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 GDF10P55107 478 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 E2F5Q15329 346 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 SGSM1Q2NKQ1 1148 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 PTPN20Q4JDL3 420 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 SCARA5Q6ZMJ2 495 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 FAM47EQ6ZV65 393 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 ASRGL1Q7L266 308 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 ERICH1Q86X53 443 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 ZBED8Q8IZ13 594 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 TMEM130Q8N3G9 435 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 GBP7Q8N8V2 638 aaPredicted RBP11.52□□□□□ -0.57
BEST1-201ENST00000378043 ADAM33Q9BZ11 813 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 ZNF518BQ9C0D4 1074 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 PCDHGC3Q9UN70 934 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 TRIM33Q9UPN9 1127 aa11.52□□□□□ -0.57
BEST1-201ENST00000378043 FARP1Q9Y4F1 1045 aaPredicted RBP11.52□□□□□ -0.57
BEST1-201ENST00000378043 SOWAHBA6NEL2 793 aa11.51□□□□□ -0.57
BEST1-201ENST00000378043 ZBTB42B2RXF5 422 aa11.51□□□□□ -0.57
BEST1-201ENST00000378043 IGF2BP3O00425 579 aaKnown RBP eCLIP11.51□□□□□ -0.57
BEST1-201ENST00000378043 HGSO14964 777 aaPredicted RBP11.51□□□□□ -0.57
BEST1-201ENST00000378043 MAGEB2O15479 319 aa11.51□□□□□ -0.57
BEST1-201ENST00000378043 IFNB1P01574 187 aa11.51□□□□□ -0.57
BEST1-201ENST00000378043 SRGAP2CP0DJJ0 459 aa11.51□□□□□ -0.57
BEST1-201ENST00000378043 TCF7P36402 384 aaPredicted RBP11.51□□□□□ -0.57
BEST1-201ENST00000378043 GPX6P59796 221 aa11.51□□□□□ -0.57
BEST1-201ENST00000378043 SLC25A11Q02978 314 aaKnown RBP11.51□□□□□ -0.57
BEST1-201ENST00000378043 DUOXA2Q1HG44 320 aa11.51□□□□□ -0.57
BEST1-201ENST00000378043 RNF43Q68DV7 783 aa11.51□□□□□ -0.57
BEST1-201ENST00000378043 CDCA2Q69YH5 1023 aaPredicted RBP11.51□□□□□ -0.57
BEST1-201ENST00000378043 DENND1BQ6P3S1 775 aa11.51□□□□□ -0.57
BEST1-201ENST00000378043 CEP128Q6ZU80 1094 aa11.51□□□□□ -0.57
BEST1-201ENST00000378043 KIF2BQ8N4N8 673 aa11.51□□□□□ -0.57
BEST1-201ENST00000378043 JOSD2Q8TAC2 188 aa11.51□□□□□ -0.57
BEST1-201ENST00000378043 TTC25Q96NG3 672 aa11.51□□□□□ -0.57
BEST1-201ENST00000378043 NCAPGQ9BPX3 1015 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms