RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 AFF4Q9UHB7 1163 aaKnown RBP9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 SIK3Q9Y2K2 1263 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 IGSF9BQ9UPX0 1349 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 TNPO2O14787 897 aaKnown RBP9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 RGL2O15211 777 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 NOL3O60936 208 aaKnown RBP9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 CYP2C9P11712 490 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 ETS1P14921 441 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 CDC25CP30307 473 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 PLIN5Q00G26 463 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 CDR2Q01850 454 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 SGSM1Q2NKQ1 1148 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 KIF19Q2TAC6 998 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 MEI1Q5TIA1 1274 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 MAP1SQ66K74 1059 aaPredicted RBP9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 PARP9Q8IXQ6 854 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 C2orf69Q8N8R5 385 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 ARMC2Q8NEN0 867 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 FAM111AQ96PZ2 611 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 CARD9Q9H257 536 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 BFARQ9NZS9 450 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 NUDT5Q9UKK9 219 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 APOBEC2Q9Y235 224 aaKnown RBP9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 DIS3Q9Y2L1 958 aaKnown RBP9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 HES2Q9Y543 173 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 LRP5O75197 1615 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 CYP2C8P10632 490 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 ACO1P21399 889 aaKnown RBP9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 GNASQ5JWF2 1037 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 ACAD10Q6JQN1 1059 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 LRRC55Q6ZSA7 311 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 NDUFAF2Q8N183 169 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 SLC25A41Q8N5S1 370 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 TTC13Q8NBP0 860 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 CCHCR1Q8TD31 782 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 ADA2Q9NZK5 511 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 CPSF2Q9P2I0 782 aaKnown RBP9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 SALL4Q9UJQ4 1053 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 GTF3C4Q9UKN8 822 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 PNMA3Q9UL41 463 aa9.55□□□□□ -0.88
SMARCA1-202ENST00000371122 ZBBXA8MT70 800 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 SCAMP3O14828 347 aaKnown RBP9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 ZNF263O14978 683 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 RARAP10276 462 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 ITGB5P18084 799 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 AKAP5P24588 427 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 SSTR1P30872 391 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 ETFBP38117 255 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 TAF1CQ15572 869 aaPredicted RBP9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 ARL13BQ3SXY8 428 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 WDR93Q6P2C0 686 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 CES3Q6UWW8 571 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 RPAINQ86UA6 219 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 ARID3BQ8IVW6 561 aaPredicted RBP9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 SLC7A14Q8TBB6 771 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 ACTL9Q8TC94 416 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 HNRNPLLQ8WVV9 542 aaKnown RBP9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 NIF3L1Q9GZT8 377 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 MRPL46Q9H2W6 279 aaKnown RBP9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 VIPAS39Q9H9C1 493 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 LRRC10BA6NIK2 292 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 ADM5C9JUS6 153 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 CASQ2O14958 399 aaPredicted RBP9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 CTCFP49711 727 aaPredicted RBP9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 SULT1E1P49888 294 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 OTUD4Q01804 1114 aaKnown RBP9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 ZBTB41Q5SVQ8 909 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 CEP120Q8N960 986 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 OSMRQ99650 979 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 MKNK1Q9BUB5 465 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 PABPC3Q9H361 631 aaKnown RBP9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 CISHQ9NSE2 258 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 NOP53Q9NZM5 478 aaKnown RBP9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 IGF2BP3O00425 579 aaKnown RBP eCLIP9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 C2CD2LO14523 706 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 APOL1O14791 398 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 NKRFO15226 690 aaKnown RBP eCLIP9.54□□□□□ -0.886e-8■■■□□ 16.7
SMARCA1-202ENST00000371122 EIF3DO15371 548 aaKnown RBP eCLIP9.54□□□□□ -0.883e-8■□□□□ 10.2
SMARCA1-202ENST00000371122 EXTL3O43909 919 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 SMARCA1P28370 1054 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 NT5C2P49902 561 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 EFNA5P52803 228 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 YWHAHQ04917 246 aaPredicted RBP9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 PTK7Q13308 1070 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 EFHC2Q5JST6 749 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 GBP7Q8N8V2 638 aaPredicted RBP9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 LRGUKQ96M69 825 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 THTPAQ9BU02 230 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 OSBPL1AQ9BXW6 950 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 C2orf40Q9H1Z8 148 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.54□□□□□ -0.882e-7■□□□□ 8.8
SMARCA1-202ENST00000371122 HACD3Q9P035 362 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 PPME1Q9Y570 386 aa9.54□□□□□ -0.88
SMARCA1-202ENST00000371122 RP1L1Q8IWN7 2480 aaPredicted RBP9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 hCG_2014768A0A024R1R8 64 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 CCL15-CCL14A0A0B4J2E2 113 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 TTC36A6NLP5 189 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 TRIM49D1C9J1S8 452 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 F8VP50 259 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 SPECC1L-ADORA2AF8WAN1 911 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms