RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 TRMUO75648 421 aaKnown RBP17.39■□□□□ 0.37
PACS1-201ENST00000320580 APBA3O96018 575 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 AKR1B1P15121 316 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 ARL1P40616 181 aaPredicted RBP17.39■□□□□ 0.37
PACS1-201ENST00000320580 PRKCIP41743 596 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 SP4Q02446 784 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 CENPCQ03188 943 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 ZC2HC1CQ53FD0 456 aaPredicted RBP17.39■□□□□ 0.37
PACS1-201ENST00000320580 TPTE2Q6XPS3 522 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 ZNF804AQ7Z570 1209 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 POMGNT1Q8WZA1 660 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 hCG_1984214I3L0E3 225 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 GNAZP19086 355 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 CYP11B2P19099 503 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 MRPS15P82914 257 aaKnown RBP17.38■□□□□ 0.37
PACS1-201ENST00000320580 TBCCQ15814 346 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 EPC2Q52LR7 807 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 C11orf63Q6NUN7 778 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 RINLQ6ZS11 566 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 ZNF713Q8N859 430 aaPredicted RBP17.38■□□□□ 0.37
PACS1-201ENST00000320580 ANO3Q9BYT9 981 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 TIMMDC1Q9NPL8 285 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 SLC24A2Q9UI40 661 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 RBMX2Q9Y388 322 aaKnown RBP17.38■□□□□ 0.37
PACS1-201ENST00000320580 RPS6KL1Q9Y6S9 549 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 C2orf71A6NGG8 1288 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 PROCP04070 461 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 GYS1P13807 737 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 RFX1P22670 979 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 TRABD2AQ86V40 505 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 CPA5Q8WXQ8 436 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 TMA16Q96EY4 203 aaKnown RBP17.38■□□□□ 0.37
PACS1-201ENST00000320580 ECHS1P30084 290 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 HSPA13P48723 471 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 BRDTQ58F21 947 aaPredicted RBP17.38■□□□□ 0.37
PACS1-201ENST00000320580 FAM102BQ5T8I3 360 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 TTC33Q6PID6 262 aaPredicted RBP17.38■□□□□ 0.37
PACS1-201ENST00000320580 KCNK18Q7Z418 384 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 AFAP1L2Q8N4X5 818 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 LNX1Q8TBB1 728 aaPredicted RBP17.38■□□□□ 0.37
PACS1-201ENST00000320580 ZNF398Q8TD17 642 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 ACCSQ96QU6 501 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 ING2Q9H160 280 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 VPS11Q9H270 941 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 SPC25Q9HBM1 224 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 TAS2R1Q9NYW7 299 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 GRHL1Q9NZI5 618 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 ZNF232Q9UNY5 417 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 TCRBV5S4A2TA0A5A2 114 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 PALM3A6NDB9 673 aaPredicted RBP17.38■□□□□ 0.37
PACS1-201ENST00000320580 ANKRD63C9JTQ0 380 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 NEMP1O14524 444 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 TM9SF1O15321 606 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 CAMTA2O94983 1202 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 SLC1A1P43005 524 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 SLC1A5Q15758 541 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 C2CD6Q53TS8 623 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 CYP4X1Q8N118 509 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 NDUFAF2Q8N183 169 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 EFCAB3Q8N7B9 438 aa17.38■□□□□ 0.37
PACS1-201ENST00000320580 ENDOVQ8N8Q3 282 aaKnown RBP17.38■□□□□ 0.37
PACS1-201ENST00000320580 RBM17Q96I25 401 aaKnown RBP17.38■□□□□ 0.37
PACS1-201ENST00000320580 DLG5Q8TDM6 1919 aa17.37■□□□□ 0.37
PACS1-201ENST00000320580 SRP68Q9UHB9 627 aaKnown RBP17.37■□□□□ 0.37
PACS1-201ENST00000320580 GTF3C4Q9UKN8 822 aa17.37■□□□□ 0.37
PACS1-201ENST00000320580 PHF24Q9UPV7 400 aa17.37■□□□□ 0.37
PACS1-201ENST00000320580 PIK3CDO00329 1044 aa17.37■□□□□ 0.37
PACS1-201ENST00000320580 SSTR1P30872 391 aa17.37■□□□□ 0.37
PACS1-201ENST00000320580 NUDT2P50583 147 aa17.37■□□□□ 0.37
PACS1-201ENST00000320580 HPCAP84074 193 aa17.37■□□□□ 0.37
PACS1-201ENST00000320580 ALYREFQ86V81 257 aaKnown RBP17.37■□□□□ 0.37
PACS1-201ENST00000320580 SPIRE2Q8WWL2 714 aa17.37■□□□□ 0.37
PACS1-201ENST00000320580 TUBA8Q9NY65 449 aaPredicted RBP17.37■□□□□ 0.37
PACS1-201ENST00000320580 IL6STP40189 918 aaPredicted RBP17.37■□□□□ 0.37
PACS1-201ENST00000320580 NR1H2P55055 460 aa17.37■□□□□ 0.37
PACS1-201ENST00000320580 RPS6P62753 249 aaKnown RBP17.37■□□□□ 0.37
PACS1-201ENST00000320580 UBXN2AP68543 259 aa17.37■□□□□ 0.37
PACS1-201ENST00000320580 HSPBAP1Q96EW2 488 aa17.37■□□□□ 0.37
PACS1-201ENST00000320580 GJD4Q96KN9 370 aaPredicted RBP17.37■□□□□ 0.37
PACS1-201ENST00000320580 DMTF1Q9Y222 760 aa17.37■□□□□ 0.37
PACS1-201ENST00000320580 ANKRD26Q9UPS8 1709 aa17.37■□□□□ 0.37
PACS1-201ENST00000320580 AKAP12Q02952 1782 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 C1orf232A0A0U1RR37 186 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 A0A1W2PPM1 405 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 NKRFO15226 690 aaKnown RBP eCLIP17.36■□□□□ 0.37
PACS1-201ENST00000320580 ZSCAN9O15535 394 aaPredicted RBP17.36■□□□□ 0.37
PACS1-201ENST00000320580 RASA1P20936 1047 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 GARSP41250 739 aaKnown RBP17.36■□□□□ 0.37
PACS1-201ENST00000320580 TTC27Q6P3X3 843 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 FAM196AQ6ZSG2 479 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 PACSIN3Q9UKS6 424 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 CAPN8A6NHC0 703 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 ALDH1A3P47895 512 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 WDR4P57081 412 aaKnown RBP17.36■□□□□ 0.37
PACS1-201ENST00000320580 TFDP1Q14186 410 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 TMEM110Q86TL2 294 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 TMCO5AQ8N6Q1 288 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 XXYLT1Q8NBI6 393 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 KCTD6Q8NC69 237 aa17.36■□□□□ 0.37
PACS1-201ENST00000320580 RBM15BQ8NDT2 890 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms