RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 CYP39A1Q9NYL5 469 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 FAM95CA0A1B0GW59 222 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 NFX1Q12986 1120 aaKnown RBP8.56□□□□□ -1.04
APOB-201ENST00000233242 STOX1Q6ZVD7 989 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 AGR3Q8TD06 166 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 FAM111AQ96PZ2 611 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 CELF4Q9BZC1 486 aaKnown RBP8.56□□□□□ -1.04
APOB-201ENST00000233242 RBAKQ9NYW8 714 aaPredicted RBP8.56□□□□□ -1.04
APOB-201ENST00000233242 PP2D1A8MPX8 630 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 ERFP50548 548 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 XIAPP98170 497 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 DDR1Q08345 913 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 THAP1Q9NVV9 213 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 FEM1BQ9UK73 627 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.56□□□□□ -1.04
APOB-201ENST00000233242 AREL1O15033 823 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 FDX1P10109 184 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 ANO4Q32M45 955 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 SEL1L3Q68CR1 1132 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 SVOPQ8N4V2 548 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 CNKSR1Q969H4 720 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 CASS4Q9NQ75 786 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 DMGDHQ9UI17 866 aaKnown RBP8.56□□□□□ -1.04
APOB-201ENST00000233242 SNX13Q9Y5W8 968 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 FKBP9O95302 570 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 SGSM1Q2NKQ1 1148 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 FKBP9P1Q75LS8 142 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 C1orf131Q8NDD1 294 aaKnown RBP8.56□□□□□ -1.04
APOB-201ENST00000233242 IGDCC4Q8TDY8 1250 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 FBXO40Q9UH90 709 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 RNF103O00237 685 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 TIMM44O43615 452 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 PSMA3P25788 255 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 NR1H2P55055 460 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 DGUOKQ16854 277 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 FAM83EQ2M2I3 478 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 SLC26A11Q86WA9 606 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 OSCP1Q8WVF1 389 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 SP110Q9HB58 689 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 TMEM161AQ9NX61 479 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 SKIV2L2P42285 1042 aaKnown RBP8.55□□□□□ -1.04
APOB-201ENST00000233242 RPL5P46777 297 aaKnown RBP8.55□□□□□ -1.04
APOB-201ENST00000233242 PRKAA2P54646 552 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 TRIP4Q15650 581 aaPredicted RBP8.55□□□□□ -1.04
APOB-201ENST00000233242 TRIM71Q2Q1W2 868 aaKnown RBP8.55□□□□□ -1.04
APOB-201ENST00000233242 CLEC4GQ6UXB4 293 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 TRPC4APQ8TEL6 797 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 KLHL31Q9H511 634 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 PHGDHO43175 533 aaKnown RBP8.55□□□□□ -1.04
APOB-201ENST00000233242 ZNF23P17027 643 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 MCL1Q07820 350 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 ZNF844Q08AG5 666 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 MMRN1Q13201 1228 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 SEPT1Q8WYJ6 367 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 VPS50Q96JG6 964 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 BDH2Q9BUT1 245 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 SLC9A1P19634 815 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 MTFR1Q15390 333 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 MARK2Q7KZI7 788 aaKnown RBP8.55□□□□□ -1.04
APOB-201ENST00000233242 DDX17Q92841 729 aaKnown RBP8.55□□□□□ -1.04
APOB-201ENST00000233242 MTERF3Q96E29 417 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 MCRS1Q96EZ8 462 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 MED15Q96RN5 788 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 TMEM120AQ9BXJ8 343 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 ATXN10Q9UBB4 475 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 CLEC11AQ9Y240 323 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 ZNF263O14978 683 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 RPS6P62753 249 aaKnown RBP8.55□□□□□ -1.04
APOB-201ENST00000233242 SLC27A3Q5K4L6 730 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 TMEM117Q9H0C3 514 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 DKK3Q9UBP4 350 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 CHN2P52757 468 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 EPHA7Q15375 998 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 SPANXN2Q5MJ10 180 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 TMC3Q7Z5M5 1100 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 KRT73Q86Y46 540 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 RNF135Q8IUD6 432 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 SETD9Q8NE22 299 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 TATDN2Q93075 761 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 NRDE2Q9H7Z3 1164 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 HPS5Q9UPZ3 1129 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 FNDC3AQ9Y2H6 1198 aaKnown RBP8.55□□□□□ -1.04
APOB-201ENST00000233242 GJA3Q9Y6H8 435 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 TSPY1Q01534 308 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 ARMC3Q5W041 872 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 VPS33AQ96AX1 596 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 PLEKHA5Q9HAU0 1116 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 WFS1O76024 890 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 PDE9AO76083 593 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 KRT6AP02538 564 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 ALDH5A1P51649 535 aaPredicted RBP8.55□□□□□ -1.04
APOB-201ENST00000233242 PDCD6IPQ8WUM4 868 aaKnown RBP8.55□□□□□ -1.04
APOB-201ENST00000233242 PLGRKTQ9HBL7 147 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 RWDD3Q9Y3V2 267 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 DISP1Q96F81 1524 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 SERPINH1P50454 418 aaKnown RBP8.55□□□□□ -1.04
APOB-201ENST00000233242 TPI1P60174 286 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 C16orf72Q14CZ0 275 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 GORASP1Q9BQQ3 440 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 PAGR1Q9BTK6 254 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms