RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 TARS2Q9BW92 718 aaKnown RBP18.44■□□□□ 0.54
PHGDH-234ENST00000642041 ASB7Q9H672 318 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 LZTFL1Q9NQ48 299 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 C1orf112Q9NSG2 853 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 AKT3Q9Y243 479 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 F8VZ95 297 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 EPHB6O15197 1021 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 PROZP22891 400 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 GCLMP48507 274 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 CLCN3P51790 818 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 YWHAEP62258 255 aaKnown RBP18.43■□□□□ 0.54
PHGDH-234ENST00000642041 PPP3CAQ08209 521 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 KCNC3Q14003 757 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 MTF1Q14872 753 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 DRAP1Q14919 205 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-234ENST00000642041 ANGPT1Q15389 498 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 NAB2Q15742 525 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 DUOXA2Q1HG44 320 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 ZACNQ401N2 412 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 IQCEQ6IPM2 695 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 SYCE2Q6PIF2 218 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 C15orf39Q6ZRI6 1047 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 RSPH3Q86UC2 560 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 CRIPAKQ8N1N5 446 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 CCDC127Q96BQ5 260 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 DESI2Q9BSY9 194 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 FHOD1Q9Y613 1164 aa18.43■□□□□ 0.54
PHGDH-234ENST00000642041 MAP1BP46821 2468 aaKnown RBP18.42■□□□□ 0.54
PHGDH-234ENST00000642041 A0A0A6YYK5 440 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-234ENST00000642041 LRRIQ3A6PVS8 624 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-234ENST00000642041 ERLIN2O94905 339 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 CLTAP09496 248 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 TRIM49P0CI25 452 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 TRIM49CP0CI26 452 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 PRLRP16471 622 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 ADAM17P78536 824 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 LPIN1Q14693 890 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 DCAF4L1Q3SXM0 396 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 MARCH8Q5T0T0 291 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 SV2AQ7L0J3 742 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 CCDC105Q8IYK2 499 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 SAAL1Q96ER3 474 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 NLRP4Q96MN2 994 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 NOX5Q96PH1 765 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 NAPGQ99747 312 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-234ENST00000642041 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.42■□□□□ 0.54
PHGDH-234ENST00000642041 SMOC2Q9H3U7 446 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 PTPRHQ9HD43 1115 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 UBE2TQ9NPD8 197 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-234ENST00000642041 CNTNAP2Q9UHC6 1331 aa18.42■□□□□ 0.54
PHGDH-234ENST00000642041 PLXNA4Q9HCM2 1894 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 GOLGA8IPA6NC78 632 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 GOLGA8JA6NMD2 632 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 C2CD4DB7Z1M9 353 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 SLU7O95391 586 aaKnown RBP18.41■□□□□ 0.54
PHGDH-234ENST00000642041 TUBBP07437 444 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 ADRB2P07550 413 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 GZMAP12544 262 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 HOXB8P17481 243 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-234ENST00000642041 TNFAIP3P21580 790 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 MBTD1Q05BQ5 628 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 ZNF569Q5MCW4 686 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 CWF19L1Q69YN2 538 aaKnown RBP18.41■□□□□ 0.54
PHGDH-234ENST00000642041 PDE12Q6L8Q7 609 aaKnown RBP18.41■□□□□ 0.54
PHGDH-234ENST00000642041 NPAS4Q8IUM7 802 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 CEP112Q8N8E3 955 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 ACRBPQ8NEB7 543 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 ANKRD36BP1Q96IX9 119 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 DNAI2Q9GZS0 605 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 RPF1Q9H9Y2 349 aaKnown RBP18.41■□□□□ 0.54
PHGDH-234ENST00000642041 PLEKHA5Q9HAU0 1116 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 RNF14Q9UBS8 474 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 JRKLQ9Y4A0 524 aa18.41■□□□□ 0.54
PHGDH-234ENST00000642041 PHACTR2O75167 634 aa18.4■□□□□ 0.54
PHGDH-234ENST00000642041 TNNC2P02585 160 aa18.4■□□□□ 0.54
PHGDH-234ENST00000642041 C4BPAP04003 597 aaKnown RBP18.4■□□□□ 0.54
PHGDH-234ENST00000642041 DLATP10515 647 aaKnown RBP18.4■□□□□ 0.54
PHGDH-234ENST00000642041 AOC1P19801 751 aa18.4■□□□□ 0.54
PHGDH-234ENST00000642041 MGAT3Q09327 533 aa18.4■□□□□ 0.54
PHGDH-234ENST00000642041 SGSM1Q2NKQ1 1148 aa18.4■□□□□ 0.54
PHGDH-234ENST00000642041 PAN2Q504Q3 1202 aaKnown RBP18.4■□□□□ 0.54
PHGDH-234ENST00000642041 C1orf220Q5T0J3 134 aa18.4■□□□□ 0.54
PHGDH-234ENST00000642041 ALKBH5Q6P6C2 394 aaKnown RBP18.4■□□□□ 0.54
PHGDH-234ENST00000642041 MNS1Q8NEH6 495 aa18.4■□□□□ 0.54
PHGDH-234ENST00000642041 NLRP7Q8WX94 980 aa18.4■□□□□ 0.54
PHGDH-234ENST00000642041 SCLT1Q96NL6 688 aa18.4■□□□□ 0.54
PHGDH-234ENST00000642041 APOL5Q9BWW9 433 aa18.4■□□□□ 0.54
PHGDH-234ENST00000642041 ANKFY1Q9P2R3 1169 aa18.4■□□□□ 0.54
PHGDH-234ENST00000642041 CPSF3Q9UKF6 684 aaKnown RBP18.4■□□□□ 0.54
PHGDH-234ENST00000642041 DERAQ9Y315 318 aa18.4■□□□□ 0.54
PHGDH-234ENST00000642041 ATRXP46100 2492 aa18.4■□□□□ 0.54
PHGDH-234ENST00000642041 PI15O43692 258 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 URI1O94763 535 aaPredicted RBP18.39■□□□□ 0.53
PHGDH-234ENST00000642041 H2AFZP0C0S5 128 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 ARHGAP25P42331 645 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 DLG4P78352 724 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 DRP2Q13474 957 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 WHAMMP3Q1A5X7 153 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 ZNF568Q3ZCX4 644 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 PHLDB3Q6NSJ2 640 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms