RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 ZBTB8OSQ8IWT0 167 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 HNRNPLLQ8WVV9 542 aaKnown RBP10.61□□□□□ -0.71
PHGDH-212ENST00000641247 LPIN3Q9BQK8 851 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 ADPGKQ9BRR6 497 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 PTPRHQ9HD43 1115 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 MAFFQ9ULX9 164 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 DMXL2Q8TDJ6 3036 aa10.61□□□□□ -0.71
PHGDH-212ENST00000641247 GCN1Q92616 2671 aaKnown RBP10.6□□□□□ -0.71
PHGDH-212ENST00000641247 MARCH6O60337 910 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 MED24O75448 989 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 OAZ2O95190 189 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 HNRNPLP14866 589 aaKnown RBP eCLIP10.6□□□□□ -0.71
PHGDH-212ENST00000641247 WEE1P30291 646 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 GRM5P41594 1212 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 DGKEP52429 567 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 SEMA3BQ13214 749 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 TOB2Q14106 344 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-212ENST00000641247 DCAF4L1Q3SXM0 396 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 TRIM61Q5EBN2 209 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 TMEM150AQ86TG1 271 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 CATSPER3Q86XQ3 398 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 PIGKQ92643 395 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 PSMG2Q969U7 264 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 CRELD1Q96HD1 420 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 TMX3Q96JJ7 454 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 CDT1Q9H211 546 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 TASP1Q9H6P5 420 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 TBX20Q9UMR3 447 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 PCDHA12Q9UN75 941 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 LIMCH1Q9UPQ0 1083 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 NUB1Q9Y5A7 615 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 ADAMTS20P59510 1910 aa10.6□□□□□ -0.71
PHGDH-212ENST00000641247 EML5Q05BV3 1969 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 DSPP15924 2871 aaKnown RBP10.59□□□□□ -0.71
PHGDH-212ENST00000641247 MTMR11A4FU01 709 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 ABLIM1O14639 778 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 APBB3O95704 486 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 PRB1P04280 392 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 XRCC6P12956 609 aaKnown RBP eCLIP10.59□□□□□ -0.715e-6■■□□□ 11.5
PHGDH-212ENST00000641247 KCNE1P15382 129 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 GCFC2P16383 781 aaKnown RBP10.59□□□□□ -0.71
PHGDH-212ENST00000641247 ENGP17813 658 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 MCM4P33991 863 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 GJA4P35212 333 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 PTGER3P43115 390 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 DHPSP49366 369 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-212ENST00000641247 EPHB3P54753 998 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 PLCB2Q00722 1185 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 SPAG1Q07617 926 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 GPR17Q13304 367 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 SEZ6Q53EL9 994 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 GALNT17Q6IS24 598 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 TAS1R3Q7RTX0 852 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 RAB44Q7Z6P3 723 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-212ENST00000641247 MDM1Q8TC05 714 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 RLN3Q8WXF3 142 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 USP13Q92995 863 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-212ENST00000641247 ZBTB45Q96K62 511 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-212ENST00000641247 ZSCAN31Q96LW9 406 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-212ENST00000641247 C2orf40Q9H1Z8 148 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 TTC12Q9H892 705 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-212ENST00000641247 CACNA2D2Q9NY47 1150 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 TUBGCP4Q9UGJ1 667 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 PCDHB8Q9UN66 801 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 TNFSF13BQ9Y275 285 aa10.59□□□□□ -0.71
PHGDH-212ENST00000641247 ITPR1Q14643 2758 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 M0QZQ0 153 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 LARGE1O95461 756 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 ATF6P18850 670 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 CYP11B2P19099 503 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 NMT1P30419 496 aaKnown RBP10.58□□□□□ -0.72
PHGDH-212ENST00000641247 RPL9P32969 192 aaKnown RBP10.58□□□□□ -0.72
PHGDH-212ENST00000641247 TXKP42681 527 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 NAMPTP43490 491 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 ALDH1A3P47895 512 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 NR5A1Q13285 461 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 CUL4AQ13619 759 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 KARSQ15046 597 aaKnown RBP10.58□□□□□ -0.72
PHGDH-212ENST00000641247 SLC10A6Q3KNW5 377 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 PADI6Q6TGC4 694 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 ARMCX6Q7L4S7 300 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 CYP2U1Q7Z449 544 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 RASSF3Q86WH2 238 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 SLFN12Q8IYM2 578 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 TRIM22Q8IYM9 498 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 CMTM8Q8IZV2 173 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 PNPLA1Q8N8W4 532 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 MCPH1Q8NEM0 835 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 APPL2Q8NEU8 664 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 OR2I1PQ8NGU4 316 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 DEPTORQ8TB45 409 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 LRIG1Q96JA1 1093 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 CAMK1GQ96NX5 476 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 MTMR9Q96QG7 549 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 FNBP1Q96RU3 617 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 ACO2Q99798 780 aaKnown RBP10.58□□□□□ -0.72
PHGDH-212ENST00000641247 P2RY13Q9BPV8 354 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 TARS2Q9BW92 718 aaKnown RBP10.58□□□□□ -0.72
PHGDH-212ENST00000641247 SLC32A1Q9H598 525 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 CNTN3Q9P232 1028 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms