RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 FAM71BQ8TC56 605 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 RAD54LQ92698 747 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 KAT2BQ92831 832 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 GLT1D1Q96MS3 346 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 EDEM3Q9BZQ6 932 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 TRIM8Q9BZR9 551 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 DNAI2Q9GZS0 605 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 RASSF1Q9NS23 344 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 BMP2KQ9NSY1 1161 aaPredicted RBP12.35□□□□□ -0.43
LINC00538-201ENST00000626109 DBR1Q9UK59 544 aaKnown RBP12.35□□□□□ -0.43
LINC00538-201ENST00000626109 HAS3O00219 553 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 TNFRSF21O75509 655 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 PLA2G4BP0C869 781 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 CASP8Q14790 479 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 XKR9Q5GH70 373 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 PLA2G4FQ68DD2 849 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 ANO5Q75V66 913 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 PASD1Q8IV76 773 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 NAXEQ8NCW5 288 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 CEP170P1Q96L14 293 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 SLC13A1Q9BZW2 595 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 BHMT2Q9H2M3 363 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 RNPEPQ9H4A4 650 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 DEF6Q9H4E7 631 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 PDE11AQ9HCR9 933 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 PLAGL2Q9UPG8 496 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 PHF24Q9UPV7 400 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 C2CD2Q9Y426 696 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 JRKLQ9Y4A0 524 aa12.35□□□□□ -0.43
LINC00538-201ENST00000626109 TMEM150BA6NC51 233 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 ZBTB39O15060 712 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 STBD1O95210 358 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 RARRES1P49788 294 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 TPD52P55327 224 aaPredicted RBP12.34□□□□□ -0.43
LINC00538-201ENST00000626109 NSUN2Q08J23 767 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC00538-201ENST00000626109 PPFIA1Q13136 1202 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 MTERF2Q49AM1 385 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 SLC45A4Q5BKX6 768 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 MIIPQ5JXC2 388 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 MEI1Q5TIA1 1274 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 TRIM68Q6AZZ1 485 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 FAAH2Q6GMR7 532 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 SLC44A2Q8IWA5 706 aaPredicted RBP12.34□□□□□ -0.43
LINC00538-201ENST00000626109 NAT8LQ8N9F0 302 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 RUBCNQ92622 972 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 MFSD3Q96ES6 412 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 ALS2CR12Q96Q35 445 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 NUDT16L1Q9BRJ7 211 aaKnown RBP12.34□□□□□ -0.43
LINC00538-201ENST00000626109 NIFKQ9BYG3 293 aaKnown RBP12.34□□□□□ -0.43
LINC00538-201ENST00000626109 NDST4Q9H3R1 872 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 SLC39A2Q9NP94 309 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 CYP26B1Q9NR63 512 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 PFDN2Q9UHV9 154 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 COL1A2P08123 1366 aa12.34□□□□□ -0.43
LINC00538-201ENST00000626109 ABHD14A-ACY1A0A1B0GW23 586 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 A0A1W2PQ45 241 aaPredicted RBP12.33□□□□□ -0.44
LINC00538-201ENST00000626109 A0A1W2PQY0 241 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 ENC1O14682 589 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 ATP1A1P05023 1023 aaKnown RBP12.33□□□□□ -0.44
LINC00538-201ENST00000626109 PRLRP16471 622 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 SESN3P58005 492 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 GRM3Q14832 879 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 TTC31Q49AM3 519 aaPredicted RBP12.33□□□□□ -0.44
LINC00538-201ENST00000626109 ZNF484Q5JVG2 852 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 LEKR1Q6ZMV7 388 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 STRA8Q7Z7C7 330 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 C7orf31Q8N865 590 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 SYT2Q8N9I0 419 aaPredicted RBP12.33□□□□□ -0.44
LINC00538-201ENST00000626109 ANKLE1Q8NAG6 615 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 LRRC15Q8TF66 581 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 SEMA6BQ9H3T3 888 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 CYP4F11Q9HBI6 524 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 LUC7LQ9NQ29 371 aaKnown RBP12.33□□□□□ -0.44
LINC00538-201ENST00000626109 STARD7Q9NQZ5 370 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 TRIM10Q9UDY6 481 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 TTLL3Q9Y4R7 772 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 MYH9P35579 1960 aaKnown RBP12.33□□□□□ -0.44
LINC00538-201ENST00000626109 NRCAMQ92823 1304 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 RRN3P2A6NIE6 340 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 SMIM10L2AP0DMW4 78 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 SMIM10L2BP0DMW5 78 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 INSRRP14616 1297 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 DESP17661 470 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 SLC12A3P55017 1021 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 NPEPPSP55786 919 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 GRIK4Q16099 956 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 ASIC2Q16515 512 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 FAM47CQ5HY64 1035 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 NLRP14Q86W24 1093 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 GPBP1Q86WP2 473 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 NOA1Q8NC60 698 aaKnown RBP12.33□□□□□ -0.44
LINC00538-201ENST00000626109 KIAA0895Q8NCT3 520 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 TBATAQ96M53 351 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 SH2D3AQ9BRG2 576 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 IFIH1Q9BYX4 1025 aaKnown RBP12.33□□□□□ -0.44
LINC00538-201ENST00000626109 DONSONQ9NYP3 566 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 VPS18Q9P253 973 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 AK5Q9Y6K8 562 aa12.33□□□□□ -0.44
LINC00538-201ENST00000626109 HTTP42858 3142 aa12.32□□□□□ -0.44
LINC00538-201ENST00000626109 MYMKA6NI61 221 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms