RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ZBTB45Q96K62 511 aaPredicted RBP8.51□□□□□ -1.05
CLK1-215ENST00000621181 TMEM121BQ9BXQ6 578 aaPredicted RBP8.51□□□□□ -1.05
CLK1-215ENST00000621181 OXCT2Q9BYC2 517 aaPredicted RBP8.51□□□□□ -1.05
CLK1-215ENST00000621181 RBSNQ9H1K0 784 aa8.51□□□□□ -1.05
CLK1-215ENST00000621181 ATXN3LQ9H3M9 355 aa8.51□□□□□ -1.05
CLK1-215ENST00000621181 C17orf75Q9HAS0 396 aa8.51□□□□□ -1.05
CLK1-215ENST00000621181 ANGPTL2Q9UKU9 493 aa8.51□□□□□ -1.05
CLK1-215ENST00000621181 E9PMD0 336 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 M0QZQ0 153 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 ABLIM1O14639 778 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 AXIN1O15169 862 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 CLDN3O15551 220 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 OAZ2O95190 189 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 CXCL8P10145 99 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 SPAG1Q07617 926 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 CCINQ13939 588 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 CCDC6Q16204 474 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 ARHGAP29Q52LW3 1261 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 ARHGAP15Q53QZ3 475 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 GAREM2Q75VX8 874 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 TMC8Q8IU68 726 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 DAW1Q8N136 415 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 RUSC1Q9BVN2 902 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 DNAJC25Q9H1X3 360 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 FOXP1Q9H334 677 aaPredicted RBP8.5□□□□□ -1.05
CLK1-215ENST00000621181 C2orf42Q9NWW7 574 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 TMEM63CQ9P1W3 806 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 SLC27A5Q9Y2P5 690 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 CHD6Q8TD26 2715 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 GREB1Q4ZG55 1949 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 ATG2BQ96BY7 2078 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 OR6C75A6NL08 312 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 SFI1A8K8P3 1242 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 MEFVO15553 781 aaPredicted RBP8.5□□□□□ -1.05
CLK1-215ENST00000621181 RPP40O75818 363 aaKnown RBP8.5□□□□□ -1.05
CLK1-215ENST00000621181 FGF19O95750 216 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 CCDC192P0DO97 292 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 GABRR2P28476 465 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 HOXA6P31267 233 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 TRAPPC10P48553 1259 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 SMTNP53814 917 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 TNK2Q07912 1038 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 RAD51AP2Q09MP3 1159 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 GPR17Q13304 367 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 PDIA5Q14554 519 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 SF3A2Q15428 464 aaKnown RBP8.5□□□□□ -1.05
CLK1-215ENST00000621181 WDR44Q5JSH3 913 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 GPR158Q5T848 1215 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 KRT79Q5XKE5 535 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 OVOS1Q6IE37 1185 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 RINT1Q6NUQ1 792 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 ARMCX5Q6P1M9 558 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 DSTYKQ6XUX3 929 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 DNAJB7Q7Z6W7 309 aaPredicted RBP8.5□□□□□ -1.05
CLK1-215ENST00000621181 ITIH5Q86UX2 942 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 WDR5BQ86VZ2 330 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 SYNPOQ8N3V7 929 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 ATAD1Q8NBU5 361 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 BPIFB1Q8TDL5 484 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 PSMG2Q969U7 264 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 BICD1Q96G01 975 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 LRRC3Q9BY71 257 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 ARRDC1-AS1Q9H2J1 176 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 CRISPLD1Q9H336 500 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 PLEKHA5Q9HAU0 1116 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 NOL7Q9UMY1 257 aaKnown RBP8.5□□□□□ -1.05
CLK1-215ENST00000621181 ASB3Q9Y575 518 aa8.5□□□□□ -1.05
CLK1-215ENST00000621181 MTMR11A4FU01 709 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 XPOTO43592 962 aaKnown RBP8.49□□□□□ -1.05
CLK1-215ENST00000621181 SOAT2O75908 522 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 VNN2O95498 520 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 PRAMEF12O95522 483 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 CDC25AP30304 524 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 LRPAP1P30533 357 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 HOXC13P31276 330 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 PXNP49023 591 aaPredicted RBP8.49□□□□□ -1.05
CLK1-215ENST00000621181 LIMK1P53667 647 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 PLCB2Q00722 1185 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 PPP2R3AQ06190 1150 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 MCL1Q07820 350 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 MAPK7Q13164 816 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 VEPH1Q14D04 833 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 PTPAQ15257 358 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 ZRSR1Q15695 479 aaKnown RBP8.49□□□□□ -1.05
CLK1-215ENST00000621181 ITPRIPL2Q3MIP1 535 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 CENPPQ6IPU0 288 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 C1orf186Q6ZWK4 172 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 CACNA2D4Q7Z3S7 1137 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 TMEM130Q8N3G9 435 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 TTC9BQ8N6N2 239 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 IGSF22Q8N9C0 903 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 LRRC3BQ96PB8 259 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 GCNAQ96QF7 691 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 SEPT5Q99719 369 aaPredicted RBP8.49□□□□□ -1.05
CLK1-215ENST00000621181 THG1LQ9NWX6 298 aaKnown RBP8.49□□□□□ -1.05
CLK1-215ENST00000621181 OBP2AQ9NY56 170 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.49□□□□□ -1.05
CLK1-215ENST00000621181 KCNG1Q9UIX4 513 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 UBQLN1Q9UMX0 589 aaKnown RBP8.49□□□□□ -1.05
CLK1-215ENST00000621181 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms