RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ALG3Q92685 438 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 AS3MTQ9HBK9 375 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 ENTPD5O75356 428 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 EEF1DP29692 281 aaKnown RBP15.34■□□□□ 0.05
VPS36-207ENST00000611132 SDC4P31431 198 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 Q4G0T1 1027 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 WLSQ5T9L3 541 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 SWSAP1Q6NVH7 229 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 ZNF184Q99676 751 aaPredicted RBP15.34■□□□□ 0.05
VPS36-207ENST00000611132 FAM192AQ9GZU8 254 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 KCTD10Q9H3F6 313 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 XAB2Q9HCS7 855 aaKnown RBP15.34■□□□□ 0.05
VPS36-207ENST00000611132 PCDHA10Q9Y5I2 948 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 FGRP09769 529 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 SRGAP2BP0DMP2 458 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 ATP6V1B1P15313 513 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 MARCKSL1P49006 195 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 NPY5RQ15761 445 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 SLC27A3Q5K4L6 730 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 PPP2R3CQ969Q6 453 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 CCDC97Q96F63 343 aaPredicted RBP15.34■□□□□ 0.05
VPS36-207ENST00000611132 ZNF277Q9NRM2 450 aaPredicted RBP15.34■□□□□ 0.05
VPS36-207ENST00000611132 TAGLN3Q9UI15 199 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 DTNAQ9Y4J8 743 aa15.34■□□□□ 0.05
VPS36-207ENST00000611132 RNF103-CHMP3A0A140T963 221 aa15.33■□□□□ 0.05
VPS36-207ENST00000611132 FCHO1O14526 889 aa15.33■□□□□ 0.05
VPS36-207ENST00000611132 DNALI1O14645 258 aaPredicted RBP15.33■□□□□ 0.05
VPS36-207ENST00000611132 BNIP1Q12981 228 aa15.33■□□□□ 0.05
VPS36-207ENST00000611132 KIF22Q14807 665 aa15.33■□□□□ 0.05
VPS36-207ENST00000611132 PARP6Q2NL67 630 aa15.33■□□□□ 0.05
VPS36-207ENST00000611132 SMIM5Q71RC9 77 aa15.33■□□□□ 0.05
VPS36-207ENST00000611132 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.33■□□□□ 0.05
VPS36-207ENST00000611132 TCP10LQ8TDR4 215 aa15.33■□□□□ 0.05
VPS36-207ENST00000611132 HAS1Q92839 578 aa15.33■□□□□ 0.05
VPS36-207ENST00000611132 RTFDC1Q9BY42 306 aaPredicted RBP15.33■□□□□ 0.05
VPS36-207ENST00000611132 GRID1Q9ULK0 1009 aa15.33■□□□□ 0.05
VPS36-207ENST00000611132 KCNQ2O43526 872 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 ARHGEF19Q8IW93 802 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 LRRC57Q8N9N7 239 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 TBC1D16Q8TBP0 767 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 OPTNQ96CV9 577 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 POP1Q99575 1024 aaKnown RBP15.33■□□□□ 0.04
VPS36-207ENST00000611132 RHBDL2Q9NX52 303 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 PAK5Q9P286 719 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 ZNF212Q9UDV6 495 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 SHOC2Q9UQ13 582 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 WFS1O76024 890 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 ASNSP08243 561 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 BGNP21810 368 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 MUTP22033 750 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 AP3M2P53677 418 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 OCRLQ01968 901 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 ZNF268Q14587 947 aaPredicted RBP15.33■□□□□ 0.04
VPS36-207ENST00000611132 PODNQ7Z5L7 613 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 FAM71DQ8N9W8 422 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 ACSF2Q96CM8 615 aaPredicted RBP15.33■□□□□ 0.04
VPS36-207ENST00000611132 MRPL46Q9H2W6 279 aaKnown RBP15.33■□□□□ 0.04
VPS36-207ENST00000611132 CCDC134Q9H6E4 229 aa15.33■□□□□ 0.04
VPS36-207ENST00000611132 PAIP2BQ9ULR5 123 aaKnown RBP15.33■□□□□ 0.04
VPS36-207ENST00000611132 M0QYV0 167 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 KCNA1Q09470 495 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 NCOA4Q13772 614 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 SMTNL2Q2TAL5 461 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 CCNYL1Q8N7R7 359 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 ZNF341Q9BYN7 854 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 WDR35Q9P2L0 1181 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 SLIT3O75094 1523 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 PSMG1O95456 288 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 PECAM1P16284 738 aaPredicted RBP15.32■□□□□ 0.04
VPS36-207ENST00000611132 BTKQ06187 659 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 MCL1Q07820 350 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 DUOXA2Q1HG44 320 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 CLEC16AQ2KHT3 1053 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 NLGN1Q8N2Q7 840 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 EME1Q96AY2 570 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 TRIM15Q9C019 465 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 ERVK-5Q9HDB9 667 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 AFG3L2Q9Y4W6 797 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 AIM2O14862 343 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 CCNHP51946 323 aaPredicted RBP15.32■□□□□ 0.04
VPS36-207ENST00000611132 AQP5P55064 265 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 SMAD1Q15797 465 aaKnown RBP15.32■□□□□ 0.04
VPS36-207ENST00000611132 MFSD5Q6N075 450 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 TAS1R2Q8TE23 839 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 THAP11Q96EK4 314 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 TMEM121Q9BTD3 319 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 LRRC19Q9H756 370 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 RAVER2Q9HCJ3 691 aaKnown RBP15.32■□□□□ 0.04
VPS36-207ENST00000611132 RPL26L1Q9UNX3 145 aaKnown RBP15.32■□□□□ 0.04
VPS36-207ENST00000611132 ABCC6O95255 1503 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 APOL1O14791 398 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 ENO3P13929 434 aaPredicted RBP15.32■□□□□ 0.04
VPS36-207ENST00000611132 ADRA1DP25100 572 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 MAPK6Q16659 721 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 ASTE1Q2TB18 679 aaPredicted RBP15.32■□□□□ 0.04
VPS36-207ENST00000611132 TFDP3Q5H9I0 405 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 CDC42EP5Q6NZY7 148 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 GALNT4Q8N4A0 578 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 MED10Q9BTT4 135 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 FRMD8Q9BZ67 464 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms