RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 RC3H2Q9HBD1 1191 aaKnown RBP19.82■□□□□ 0.76
SSBP4-212ENST00000601919 ADAM28Q9UKQ2 775 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 L1RE1Q9UN81 338 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 PRG3Q9Y2Y8 225 aaPredicted RBP19.82■□□□□ 0.76
SSBP4-212ENST00000601919 INSL6Q9Y581 213 aa19.82■□□□□ 0.76
SSBP4-212ENST00000601919 EPN1Q9Y6I3 576 aaPredicted RBP19.82■□□□□ 0.76
SSBP4-212ENST00000601919 MED7O43513 233 aa19.81■□□□□ 0.76
SSBP4-212ENST00000601919 B4GALT3O60512 393 aa19.81■□□□□ 0.76
SSBP4-212ENST00000601919 GALTP07902 379 aa19.81■□□□□ 0.76
SSBP4-212ENST00000601919 PLEKP08567 350 aaPredicted RBP19.81■□□□□ 0.76
SSBP4-212ENST00000601919 LAG3P18627 525 aa19.81■□□□□ 0.76
SSBP4-212ENST00000601919 TYMPP19971 482 aa19.81■□□□□ 0.76
SSBP4-212ENST00000601919 GNA15P30679 374 aa19.81■□□□□ 0.76
SSBP4-212ENST00000601919 SLC11A1P49279 550 aa19.81■□□□□ 0.76
SSBP4-212ENST00000601919 KIF11P52732 1056 aa19.81■□□□□ 0.76
SSBP4-212ENST00000601919 NDST1P52848 882 aa19.81■□□□□ 0.76
SSBP4-212ENST00000601919 BCAR1P56945 870 aa19.81■□□□□ 0.76
SSBP4-212ENST00000601919 ZNF571Q7Z3V5 609 aaPredicted RBP19.81■□□□□ 0.76
SSBP4-212ENST00000601919 GPIHBP1Q8IV16 184 aa19.81■□□□□ 0.76
SSBP4-212ENST00000601919 TNIP3Q96KP6 325 aa19.81■□□□□ 0.76
SSBP4-212ENST00000601919 AGPAT1Q99943 283 aa19.81■□□□□ 0.76
SSBP4-212ENST00000601919 MRPL45Q9BRJ2 306 aaKnown RBP19.81■□□□□ 0.76
SSBP4-212ENST00000601919 LUC7LQ9NQ29 371 aaKnown RBP19.81■□□□□ 0.76
SSBP4-212ENST00000601919 AAASQ9NRG9 546 aa19.81■□□□□ 0.76
SSBP4-212ENST00000601919 PUF60Q9UHX1 559 aaKnown RBP19.81■□□□□ 0.76
SSBP4-212ENST00000601919 PCDHB8Q9UN66 801 aa19.81■□□□□ 0.76
SSBP4-212ENST00000601919 ZKSCAN5Q9Y2L8 839 aa19.81■□□□□ 0.76
SSBP4-212ENST00000601919 SF3B1O75533 1304 aaKnown RBP eCLIP19.8■□□□□ 0.76
SSBP4-212ENST00000601919 A8MXQ7 604 aa19.8■□□□□ 0.76
SSBP4-212ENST00000601919 EIF3CLB5ME19 914 aaKnown RBP19.8■□□□□ 0.76
SSBP4-212ENST00000601919 NDUFA10O95299 355 aa19.8■□□□□ 0.76
SSBP4-212ENST00000601919 CYP11A1P05108 521 aa19.8■□□□□ 0.76
SSBP4-212ENST00000601919 ATP2A2P16615 1042 aaKnown RBP19.8■□□□□ 0.76
SSBP4-212ENST00000601919 RAD23BP54727 409 aa19.8■□□□□ 0.76
SSBP4-212ENST00000601919 KRT83P78385 493 aa19.8■□□□□ 0.76
SSBP4-212ENST00000601919 HTRA4P83105 476 aaPredicted RBP19.8■□□□□ 0.76
SSBP4-212ENST00000601919 CDR2Q01850 454 aa19.8■□□□□ 0.76
SSBP4-212ENST00000601919 ZNF394Q53GI3 561 aa19.8■□□□□ 0.76
SSBP4-212ENST00000601919 WSCD1Q658N2 575 aa19.8■□□□□ 0.76
SSBP4-212ENST00000601919 CD300LGQ6UXG3 332 aa19.8■□□□□ 0.76
SSBP4-212ENST00000601919 RAD9BQ6WBX8 426 aa19.8■□□□□ 0.76
SSBP4-212ENST00000601919 NOP9Q86U38 636 aaKnown RBP19.8■□□□□ 0.76
SSBP4-212ENST00000601919 HERC6Q8IVU3 1022 aa19.8■□□□□ 0.76
SSBP4-212ENST00000601919 TXLNBQ8N3L3 684 aa19.8■□□□□ 0.76
SSBP4-212ENST00000601919 HASPINQ8TF76 798 aa19.8■□□□□ 0.76
SSBP4-212ENST00000601919 ZNF558Q96NG5 402 aa19.8■□□□□ 0.76
SSBP4-212ENST00000601919 EIF3CQ99613 913 aaKnown RBP19.8■□□□□ 0.76
SSBP4-212ENST00000601919 PDCL3Q9H2J4 239 aa19.8■□□□□ 0.76
SSBP4-212ENST00000601919 CWH43Q9H720 699 aa19.8■□□□□ 0.76
SSBP4-212ENST00000601919 CXXC1Q9P0U4 656 aaPredicted RBP19.8■□□□□ 0.76
SSBP4-212ENST00000601919 COL4A6Q14031 1691 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 SYN3O14994 580 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 CCP110O43303 1012 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 THAP12O43422 761 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 VDRP11473 427 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 CD19P15391 556 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 PCSK1P29120 753 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 BRCC3P46736 316 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 STILQ15468 1287 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 SLC18A3Q16572 532 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 ASTE1Q2TB18 679 aaPredicted RBP19.79■□□□□ 0.76
SSBP4-212ENST00000601919 TRIM72Q6ZMU5 477 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 THEM5Q8N1Q8 247 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 FIBCD1Q8N539 461 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 SLC4A11Q8NBS3 891 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 WHAMMQ8TF30 809 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 KBTBD7Q8WVZ9 684 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 HEXIM2Q96MH2 286 aaKnown RBP19.79■□□□□ 0.76
SSBP4-212ENST00000601919 RAD9AQ99638 391 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 SEPT11Q9NVA2 429 aaKnown RBP19.79■□□□□ 0.76
SSBP4-212ENST00000601919 NOCTQ9UK39 431 aaKnown RBP19.79■□□□□ 0.76
SSBP4-212ENST00000601919 STXBP5LQ9Y2K9 1186 aa19.79■□□□□ 0.76
SSBP4-212ENST00000601919 GABRDO14764 452 aa19.78■□□□□ 0.76
SSBP4-212ENST00000601919 ITGB1P05556 798 aa19.78■□□□□ 0.76
SSBP4-212ENST00000601919 CCDC175P0C221 793 aa19.78■□□□□ 0.76
SSBP4-212ENST00000601919 MAGEA10P43363 369 aaPredicted RBP19.78■□□□□ 0.76
SSBP4-212ENST00000601919 SGO2Q562F6 1265 aa19.78■□□□□ 0.76
SSBP4-212ENST00000601919 C10orf76Q5T2E6 689 aa19.78■□□□□ 0.76
SSBP4-212ENST00000601919 PPP1R2P3Q6NXS1 205 aa19.78■□□□□ 0.76
SSBP4-212ENST00000601919 TMCO2Q7Z6W1 182 aaPredicted RBP19.78■□□□□ 0.76
SSBP4-212ENST00000601919 CRYBG2Q8N1P7 616 aa19.78■□□□□ 0.76
SSBP4-212ENST00000601919 ELOVL4Q9GZR5 314 aa19.78■□□□□ 0.76
SSBP4-212ENST00000601919 PCDH10Q9P2E7 1040 aa19.78■□□□□ 0.76
SSBP4-212ENST00000601919 STK39Q9UEW8 545 aa19.78■□□□□ 0.76
SSBP4-212ENST00000601919 ADAMTS1Q9UHI8 967 aa19.78■□□□□ 0.76
SSBP4-212ENST00000601919 CEP83Q9Y592 693 aa19.78■□□□□ 0.76
SSBP4-212ENST00000601919 TSC2P49815 1807 aa19.77■□□□□ 0.76
SSBP4-212ENST00000601919 ZSCAN12O43309 604 aa19.77■□□□□ 0.76
SSBP4-212ENST00000601919 LCA5LO95447 670 aa19.77■□□□□ 0.76
SSBP4-212ENST00000601919 IGFBP6P24592 240 aaPredicted RBP19.77■□□□□ 0.76
SSBP4-212ENST00000601919 PPM1AP35813 382 aa19.77■□□□□ 0.76
SSBP4-212ENST00000601919 MTF1Q14872 753 aa19.77■□□□□ 0.76
SSBP4-212ENST00000601919 RASIP1Q5U651 963 aa19.77■□□□□ 0.76
SSBP4-212ENST00000601919 TAF3Q5VWG9 929 aa19.77■□□□□ 0.76
SSBP4-212ENST00000601919 OVOS1Q6IE37 1185 aa19.77■□□□□ 0.76
SSBP4-212ENST00000601919 KCNT2Q6UVM3 1135 aa19.77■□□□□ 0.76
SSBP4-212ENST00000601919 SLC20A1Q8WUM9 679 aa19.77■□□□□ 0.76
SSBP4-212ENST00000601919 ZNF606Q8WXB4 792 aa19.77■□□□□ 0.76
SSBP4-212ENST00000601919 DDX1Q92499 740 aaKnown RBP19.77■□□□□ 0.76
SSBP4-212ENST00000601919 TWNKQ96RR1 684 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms