RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 WDR72Q3MJ13 1102 aa21.1■□□□□ 0.97
SHKBP1-214ENST00000597396 ZNF667Q5HYK9 610 aa21.1■□□□□ 0.97
SHKBP1-214ENST00000597396 RARS2Q5T160 578 aaKnown RBP21.1■□□□□ 0.97
SHKBP1-214ENST00000597396 LIN9Q5TKA1 542 aa21.1■□□□□ 0.97
SHKBP1-214ENST00000597396 KRT39Q6A163 491 aa21.1■□□□□ 0.97
SHKBP1-214ENST00000597396 SYCE2Q6PIF2 218 aa21.1■□□□□ 0.97
SHKBP1-214ENST00000597396 C15orf39Q6ZRI6 1047 aa21.1■□□□□ 0.97
SHKBP1-214ENST00000597396 ADGRF2Q8IZF7 708 aa21.1■□□□□ 0.97
SHKBP1-214ENST00000597396 IMPG2Q9BZV3 1241 aa21.1■□□□□ 0.97
SHKBP1-214ENST00000597396 SFXN1Q9H9B4 322 aa21.1■□□□□ 0.97
SHKBP1-214ENST00000597396 ANO10Q9NW15 660 aa21.1■□□□□ 0.97
SHKBP1-214ENST00000597396 FAM50BQ9Y247 325 aa21.1■□□□□ 0.97
SHKBP1-214ENST00000597396 BDP1A6H8Y1 2624 aa21.1■□□□□ 0.97
SHKBP1-214ENST00000597396 WDR27A2RRH5 827 aa21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 CCDC192P0DO97 292 aa21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 COL9A1P20849 921 aa21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 ELF1P32519 619 aa21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 MCCD1P59942 119 aaPredicted RBP21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 MYL7Q01449 175 aa21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 SMAD4Q13485 552 aaKnown RBP21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 STX1AQ16623 288 aa21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 SGSM1Q2NKQ1 1148 aa21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 KLHL40Q2TBA0 621 aa21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 PUS10Q3MIT2 529 aaKnown RBP21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 CT47A1Q5JQC4 288 aaPredicted RBP21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 PTCRAQ6ISU1 281 aaPredicted RBP21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 DPH6Q7L8W6 267 aa21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 C12orf76Q8N812 135 aaPredicted RBP21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 SMRP1Q8NCR6 262 aa21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 CCDC150Q8NCX0 1101 aa21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 ZNF461Q8TAF7 563 aa21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 SPATA18Q8TC71 538 aa21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 XYLT2Q9H1B5 865 aa21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 NXF1Q9UBU9 619 aaKnown RBP21.09■□□□□ 0.97
SHKBP1-214ENST00000597396 MBTPS2O43462 519 aa21.08■□□□□ 0.97
SHKBP1-214ENST00000597396 OR4Q2P0C623 313 aa21.08■□□□□ 0.97
SHKBP1-214ENST00000597396 SOWAHAQ2M3V2 549 aa21.08■□□□□ 0.97
SHKBP1-214ENST00000597396 TPGS2Q68CL5 300 aa21.08■□□□□ 0.97
SHKBP1-214ENST00000597396 CES5AQ6NT32 575 aa21.08■□□□□ 0.97
SHKBP1-214ENST00000597396 CREBRFQ8IUR6 639 aa21.08■□□□□ 0.97
SHKBP1-214ENST00000597396 TAS1R2Q8TE23 839 aa21.08■□□□□ 0.97
SHKBP1-214ENST00000597396 TAF4BQ92750 862 aa21.08■□□□□ 0.97
SHKBP1-214ENST00000597396 MED15Q96RN5 788 aa21.08■□□□□ 0.97
SHKBP1-214ENST00000597396 VRTNQ9H8Y1 702 aa21.08■□□□□ 0.97
SHKBP1-214ENST00000597396 DDX43Q9NXZ2 648 aaKnown RBP21.08■□□□□ 0.97
SHKBP1-214ENST00000597396 POLIQ9UNA4 740 aa21.08■□□□□ 0.97
SHKBP1-214ENST00000597396 DOCK6Q96HP0 2047 aa21.07■□□□□ 0.96
SHKBP1-214ENST00000597396 ABLIM3O94929 683 aa21.07■□□□□ 0.96
SHKBP1-214ENST00000597396 C8AP07357 584 aa21.07■□□□□ 0.96
SHKBP1-214ENST00000597396 P4HA1P13674 534 aa21.07■□□□□ 0.96
SHKBP1-214ENST00000597396 LHX1P48742 406 aa21.07■□□□□ 0.96
SHKBP1-214ENST00000597396 TSPY1Q01534 308 aa21.07■□□□□ 0.96
SHKBP1-214ENST00000597396 ITIH3Q06033 890 aa21.07■□□□□ 0.96
SHKBP1-214ENST00000597396 TMC5Q6UXY8 1006 aa21.07■□□□□ 0.96
SHKBP1-214ENST00000597396 CCDC149Q6ZUS6 474 aa21.07■□□□□ 0.96
SHKBP1-214ENST00000597396 OSTM1Q86WC4 334 aa21.07■□□□□ 0.96
SHKBP1-214ENST00000597396 OR10T2Q8NGX3 314 aa21.07■□□□□ 0.96
SHKBP1-214ENST00000597396 SLC35C1Q96A29 364 aa21.07■□□□□ 0.96
SHKBP1-214ENST00000597396 CNOT6LQ96LI5 555 aaKnown RBP21.07■□□□□ 0.96
SHKBP1-214ENST00000597396 TMEM209Q96SK2 561 aa21.07■□□□□ 0.96
SHKBP1-214ENST00000597396 AFF4Q9UHB7 1163 aaKnown RBP21.07■□□□□ 0.96
SHKBP1-214ENST00000597396 GRXCR2A6NFK2 248 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 PRRG1O14668 218 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 RFPL2O75678 378 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 ZMYND10O75800 440 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 ASS1P00966 412 aaKnown RBP21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 ATF2P15336 505 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 MARSP56192 900 aaKnown RBP21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 ADCY1Q08828 1119 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 GPR17Q13304 367 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 PPM1LQ5SGD2 360 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 SCARA5Q6ZMJ2 495 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 RNF19BQ6ZMZ0 732 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 FBXL13Q8NEE6 735 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 SLC7A14Q8TBB6 771 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 ELMO3Q96BJ8 720 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 RTP3Q9BQQ7 232 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 PI4K2AQ9BTU6 479 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 ZCWPW1Q9H0M4 648 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 S1PR5Q9H228 398 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 ADAM7Q9H2U9 754 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 SNX25Q9H3E2 840 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 CYP4F11Q9HBI6 524 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 ZDHHC7Q9NXF8 308 aa21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 USP15Q9Y4E8 981 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-214ENST00000597396 MYH10P35580 1976 aa21.05■□□□□ 0.96
SHKBP1-214ENST00000597396 CCDC195A0A1B0GUA6 201 aa21.05■□□□□ 0.96
SHKBP1-214ENST00000597396 N4BP1O75113 896 aaKnown RBP21.05■□□□□ 0.96
SHKBP1-214ENST00000597396 WARSP23381 471 aaKnown RBP21.05■□□□□ 0.96
SHKBP1-214ENST00000597396 PCSK1P29120 753 aa21.05■□□□□ 0.96
SHKBP1-214ENST00000597396 NOP14P78316 857 aaKnown RBP21.05■□□□□ 0.96
SHKBP1-214ENST00000597396 SKOR2Q2VWA4 1001 aaPredicted RBP21.05■□□□□ 0.96
SHKBP1-214ENST00000597396 UVSSAQ2YD98 709 aa21.05■□□□□ 0.96
SHKBP1-214ENST00000597396 CBWD6Q4V339 395 aa21.05■□□□□ 0.96
SHKBP1-214ENST00000597396 SLC39A12Q504Y0 691 aa21.05■□□□□ 0.96
SHKBP1-214ENST00000597396 CBWD3Q5JTY5 395 aa21.05■□□□□ 0.96
SHKBP1-214ENST00000597396 CBWD5Q5RIA9 395 aa21.05■□□□□ 0.96
SHKBP1-214ENST00000597396 SPOPLQ6IQ16 392 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms