RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 EPHB3P54753 998 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 NRLP54845 237 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 AMPD3Q01432 767 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 DUSP4Q13115 394 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 PPP2R5DQ14738 602 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 ENOX2Q16206 610 aaKnown RBP19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 SPATA1Q5VX52 437 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 C1orf228Q6PIY5 440 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 DSTYKQ6XUX3 929 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 CD302Q8IX05 232 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 PDILTQ8N807 584 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 PGLYRP2Q96PD5 576 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 CRISPLD1Q9H336 500 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 ZHX3Q9H4I2 956 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 HSFX1Q9UBD0 423 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 ASB3Q9Y575 518 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 CITO14578 2027 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 DMXL1Q9Y485 3027 aa19■□□□□ 0.63
SHKBP1-203ENST00000594298 A0A0B4J269 797 aa19■□□□□ 0.63
SHKBP1-203ENST00000594298 HNRNPDLO14979 420 aaKnown RBP19■□□□□ 0.63
SHKBP1-203ENST00000594298 TRAK2O60296 914 aa19■□□□□ 0.63
SHKBP1-203ENST00000594298 CHRNB1P11230 501 aa19■□□□□ 0.63
SHKBP1-203ENST00000594298 SDHBP21912 280 aa19■□□□□ 0.63
SHKBP1-203ENST00000594298 CCR3P51677 355 aa19■□□□□ 0.63
SHKBP1-203ENST00000594298 FCHO2Q0JRZ9 810 aa19■□□□□ 0.63
SHKBP1-203ENST00000594298 RSPO4Q2I0M5 234 aaPredicted RBP19■□□□□ 0.63
SHKBP1-203ENST00000594298 OVOS1Q6IE37 1185 aa19■□□□□ 0.63
SHKBP1-203ENST00000594298 CENPPQ6IPU0 288 aa19■□□□□ 0.63
SHKBP1-203ENST00000594298 SHC4Q6S5L8 630 aa19■□□□□ 0.63
SHKBP1-203ENST00000594298 SLITRK6Q9H5Y7 841 aa19■□□□□ 0.63
SHKBP1-203ENST00000594298 RPF1Q9H9Y2 349 aaKnown RBP19■□□□□ 0.63
SHKBP1-203ENST00000594298 LMAN1LQ9HAT1 526 aa19■□□□□ 0.63
SHKBP1-203ENST00000594298 DNAH14Q0VDD8 3507 aa18.99■□□□□ 0.63
SHKBP1-203ENST00000594298 PDCD11Q14690 1871 aaKnown RBP18.99■□□□□ 0.63
SHKBP1-203ENST00000594298 A0A1W2PRU2 124 aa18.99■□□□□ 0.63
SHKBP1-203ENST00000594298 MTMR11A4FU01 709 aa18.99■□□□□ 0.63
SHKBP1-203ENST00000594298 CHADO15335 359 aa18.99■□□□□ 0.63
SHKBP1-203ENST00000594298 GAP43P17677 238 aa18.99■□□□□ 0.63
SHKBP1-203ENST00000594298 ANP32AP39687 249 aaKnown RBP18.99■□□□□ 0.63
SHKBP1-203ENST00000594298 ALDH1A3P47895 512 aa18.99■□□□□ 0.63
SHKBP1-203ENST00000594298 LILRA4P59901 499 aa18.99■□□□□ 0.63
SHKBP1-203ENST00000594298 RESP18Q5W5W9 173 aa18.99■□□□□ 0.63
SHKBP1-203ENST00000594298 LEO1Q8WVC0 666 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-203ENST00000594298 RSPRY1Q96DX4 576 aa18.99■□□□□ 0.63
SHKBP1-203ENST00000594298 CPSF3Q9UKF6 684 aaKnown RBP18.99■□□□□ 0.63
SHKBP1-203ENST00000594298 K7ENM7 598 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 FGF19O95750 216 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 ODC1P11926 461 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 CCNE1P24864 410 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 GUCY2FP51841 1108 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 ADALQ6DHV7 355 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 DYMQ7RTS9 669 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 YAF2Q8IY57 180 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 ATAD1Q8NBU5 361 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 CSGALNACT1Q8TDX6 532 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 PSMG2Q969U7 264 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 DHX58Q96C10 678 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 MKNK1Q9BUB5 465 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 TNMDQ9H2S6 317 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 C8orf33Q9H7E9 229 aaPredicted RBP18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 MAGEF1Q9HAY2 307 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 SEL1LQ9UBV2 794 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 DERAQ9Y315 318 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 GPR179Q6PRD1 2367 aa18.98■□□□□ 0.63
SHKBP1-203ENST00000594298 FRYLO94915 3013 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 A0A087X0B3 334 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 PRR5-ARHGAP8B1AHC4 643 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 PIRO00625 290 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 PPEF2O14830 753 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 CYP11A1P05108 521 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 TGM1P22735 817 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 WEE1P30291 646 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 ARHGAP8P85298 464 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 LMNB2Q03252 620 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 C9orf57Q5W0N0 161 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 JADE1Q6IE81 842 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 ARMCX5Q6P1M9 558 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 SLC39A4Q6P5W5 647 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 GAREM2Q75VX8 874 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 DNAJB7Q7Z6W7 309 aaPredicted RBP18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 ARID3BQ8IVW6 561 aaPredicted RBP18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 CELF5Q8N6W0 485 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 SENP8Q96LD8 212 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 FIZ1Q96SL8 496 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 MSTO1Q9BUK6 570 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 OBP2AQ9NY56 170 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 GMEB2Q9UKD1 530 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 SLC27A5Q9Y2P5 690 aa18.97■□□□□ 0.63
SHKBP1-203ENST00000594298 ANO9A1A5B4 782 aa18.96■□□□□ 0.63
SHKBP1-203ENST00000594298 MYMKA6NI61 221 aa18.96■□□□□ 0.63
SHKBP1-203ENST00000594298 POLR2DO15514 142 aaKnown RBP18.96■□□□□ 0.63
SHKBP1-203ENST00000594298 PAPSS2O95340 614 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-203ENST00000594298 CMA1P23946 247 aa18.96■□□□□ 0.63
SHKBP1-203ENST00000594298 CXCL12P48061 93 aa18.96■□□□□ 0.63
SHKBP1-203ENST00000594298 GTF2BQ00403 316 aa18.96■□□□□ 0.63
SHKBP1-203ENST00000594298 GAS6Q14393 721 aa18.96■□□□□ 0.63
SHKBP1-203ENST00000594298 E2F4Q16254 413 aa18.96■□□□□ 0.63
SHKBP1-203ENST00000594298 STXBP5Q5T5C0 1151 aa18.96■□□□□ 0.63
SHKBP1-203ENST00000594298 ITIH5Q86UX2 942 aa18.96■□□□□ 0.63
SHKBP1-203ENST00000594298 CCDC65Q8IXS2 484 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms