RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 LIMS2Q7Z4I7 341 aa20.98■□□□□ 0.95
CIRBP-220ENST00000588917 LUZP1Q86V48 1076 aa20.98■□□□□ 0.95
CIRBP-220ENST00000588917 TTC39CQ8N584 583 aa20.98■□□□□ 0.95
CIRBP-220ENST00000588917 FAM81BQ96LP2 452 aa20.98■□□□□ 0.95
CIRBP-220ENST00000588917 TLE6Q9H808 572 aa20.98■□□□□ 0.95
CIRBP-220ENST00000588917 COG5Q9UP83 839 aa20.98■□□□□ 0.95
CIRBP-220ENST00000588917 ADH1AP07327 375 aa20.97■□□□□ 0.95
CIRBP-220ENST00000588917 NOP14P78316 857 aaKnown RBP20.97■□□□□ 0.95
CIRBP-220ENST00000588917 SOWAHAQ2M3V2 549 aa20.97■□□□□ 0.95
CIRBP-220ENST00000588917 FILIP1LQ4L180 1135 aa20.97■□□□□ 0.95
CIRBP-220ENST00000588917 FKBP15Q5T1M5 1219 aa20.97■□□□□ 0.95
CIRBP-220ENST00000588917 SEMA4DQ92854 862 aa20.97■□□□□ 0.95
CIRBP-220ENST00000588917 B3GALT6Q96L58 329 aa20.97■□□□□ 0.95
CIRBP-220ENST00000588917 VPS16Q9H269 839 aa20.97■□□□□ 0.95
CIRBP-220ENST00000588917 HSD3B7Q9H2F3 369 aa20.97■□□□□ 0.95
CIRBP-220ENST00000588917 CYP3A43Q9HB55 503 aa20.97■□□□□ 0.95
CIRBP-220ENST00000588917 MTRRQ9UBK8 725 aa20.97■□□□□ 0.95
CIRBP-220ENST00000588917 DPP7Q9UHL4 492 aa20.97■□□□□ 0.95
CIRBP-220ENST00000588917 TIMM13Q9Y5L4 95 aaPredicted RBP20.97■□□□□ 0.95
CIRBP-220ENST00000588917 OR6C75A6NL08 312 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 HIDE1A8MVS5 230 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 KLRC2P26717 231 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 NDUFV1P49821 464 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 KCNQ1P51787 676 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 COPB1P53618 953 aaKnown RBP20.96■□□□□ 0.95
CIRBP-220ENST00000588917 EXOC3L4Q17RC7 722 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 CTXN3Q4LDR2 81 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 MIIPQ5JXC2 388 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 WSCD1Q658N2 575 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 PDCL2Q8N4E4 241 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 AUTS2Q8WXX7 1259 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 KLHL5Q96PQ7 755 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 PI4K2AQ9BTU6 479 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 NIF3L1Q9GZT8 377 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 SNX25Q9H3E2 840 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 TAB2Q9NYJ8 693 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 L1RE1Q9UN81 338 aa20.96■□□□□ 0.95
CIRBP-220ENST00000588917 PLXNA4Q9HCM2 1894 aa20.95■□□□□ 0.94
CIRBP-220ENST00000588917 GABRDO14764 452 aa20.95■□□□□ 0.94
CIRBP-220ENST00000588917 CNPP09543 421 aaKnown RBP20.95■□□□□ 0.94
CIRBP-220ENST00000588917 TRIM21P19474 475 aaKnown RBP20.95■□□□□ 0.94
CIRBP-220ENST00000588917 COL9A1P20849 921 aa20.95■□□□□ 0.94
CIRBP-220ENST00000588917 WARSP23381 471 aaKnown RBP20.95■□□□□ 0.94
CIRBP-220ENST00000588917 TBXAS1P24557 533 aaPredicted RBP20.95■□□□□ 0.94
CIRBP-220ENST00000588917 PCSK1P29120 753 aa20.95■□□□□ 0.94
CIRBP-220ENST00000588917 GNL1P36915 607 aaPredicted RBP20.95■□□□□ 0.94
CIRBP-220ENST00000588917 ELMSAN1Q6PJG2 1045 aa20.95■□□□□ 0.94
CIRBP-220ENST00000588917 PRSS55Q6UWB4 352 aaPredicted RBP20.95■□□□□ 0.94
CIRBP-220ENST00000588917 ADGRF2Q8IZF7 708 aa20.95■□□□□ 0.94
CIRBP-220ENST00000588917 NT5C1BQ96P26 610 aa20.95■□□□□ 0.94
CIRBP-220ENST00000588917 NECAB3Q96P71 396 aaPredicted RBP20.95■□□□□ 0.94
CIRBP-220ENST00000588917 ACBD6Q9BR61 282 aa20.95■□□□□ 0.94
CIRBP-220ENST00000588917 TEX28O15482 410 aa20.94■□□□□ 0.94
CIRBP-220ENST00000588917 TBC1D4O60343 1298 aa20.94■□□□□ 0.94
CIRBP-220ENST00000588917 CSPG5O95196 566 aa20.94■□□□□ 0.94
CIRBP-220ENST00000588917 SERPINC1P01008 464 aa20.94■□□□□ 0.94
CIRBP-220ENST00000588917 YWHAEP62258 255 aaKnown RBP20.94■□□□□ 0.94
CIRBP-220ENST00000588917 SMARCB1Q12824 385 aa20.94■□□□□ 0.94
CIRBP-220ENST00000588917 RAB33AQ14088 237 aa20.94■□□□□ 0.94
CIRBP-220ENST00000588917 SMYD5Q6GMV2 418 aa20.94■□□□□ 0.94
CIRBP-220ENST00000588917 SLC8B1Q6J4K2 584 aa20.94■□□□□ 0.94
CIRBP-220ENST00000588917 LMO3Q8TAP4 145 aa20.94■□□□□ 0.94
CIRBP-220ENST00000588917 HLA-CQ95604 372 aa20.94■□□□□ 0.94
CIRBP-220ENST00000588917 CLSTN3Q9BQT9 956 aa20.94■□□□□ 0.94
CIRBP-220ENST00000588917 DDX43Q9NXZ2 648 aaKnown RBP20.94■□□□□ 0.94
CIRBP-220ENST00000588917 GCNT4Q9P109 453 aa20.94■□□□□ 0.94
CIRBP-220ENST00000588917 FBXL5Q9UKA1 691 aa20.94■□□□□ 0.94
CIRBP-220ENST00000588917 MAFFQ9ULX9 164 aa20.94■□□□□ 0.94
CIRBP-220ENST00000588917 ATP1A3P13637 1013 aa20.93■□□□□ 0.94
CIRBP-220ENST00000588917 OR1D2P34982 312 aa20.93■□□□□ 0.94
CIRBP-220ENST00000588917 DUSP6Q16828 381 aa20.93■□□□□ 0.94
CIRBP-220ENST00000588917 SPOPLQ6IQ16 392 aa20.93■□□□□ 0.94
CIRBP-220ENST00000588917 ENOSF1Q7L5Y1 443 aa20.93■□□□□ 0.94
CIRBP-220ENST00000588917 DCP1BQ8IZD4 617 aaKnown RBP20.93■□□□□ 0.94
CIRBP-220ENST00000588917 OR6B3Q8NGW1 331 aa20.93■□□□□ 0.94
CIRBP-220ENST00000588917 JAKMIP2Q96AA8 810 aa20.93■□□□□ 0.94
CIRBP-220ENST00000588917 BCO2Q9BYV7 579 aa20.93■□□□□ 0.94
CIRBP-220ENST00000588917 INTS2Q9H0H0 1204 aaKnown RBP20.93■□□□□ 0.94
CIRBP-220ENST00000588917 APOBEC3GQ9HC16 384 aaKnown RBP20.93■□□□□ 0.94
CIRBP-220ENST00000588917 POLIQ9UNA4 740 aa20.93■□□□□ 0.94
CIRBP-220ENST00000588917 CDY1Q9Y6F8 540 aa20.93■□□□□ 0.94
CIRBP-220ENST00000588917 SRGAP2BP0DMP2 458 aa20.92■□□□□ 0.94
CIRBP-220ENST00000588917 NRIP1P48552 1158 aa20.92■□□□□ 0.94
CIRBP-220ENST00000588917 TSPY1Q01534 308 aa20.92■□□□□ 0.94
CIRBP-220ENST00000588917 GCNT1Q02742 428 aa20.92■□□□□ 0.94
CIRBP-220ENST00000588917 TCEAL5Q5H9L2 206 aa20.92■□□□□ 0.94
CIRBP-220ENST00000588917 TPGS2Q68CL5 300 aa20.92■□□□□ 0.94
CIRBP-220ENST00000588917 RBM23Q86U06 439 aaKnown RBP20.92■□□□□ 0.94
CIRBP-220ENST00000588917 UNC93AQ86WB7 457 aa20.92■□□□□ 0.94
CIRBP-220ENST00000588917 ZNF461Q8TAF7 563 aa20.92■□□□□ 0.94
CIRBP-220ENST00000588917 HDAC7Q8WUI4 952 aa20.92■□□□□ 0.94
CIRBP-220ENST00000588917 TATDN2Q93075 761 aa20.92■□□□□ 0.94
CIRBP-220ENST00000588917 CRACR2AQ9BSW2 395 aa20.92■□□□□ 0.94
CIRBP-220ENST00000588917 CDH9Q9ULB4 789 aa20.92■□□□□ 0.94
CIRBP-220ENST00000588917 LGALS16A8MUM7 142 aa20.91■□□□□ 0.94
CIRBP-220ENST00000588917 A8MXQ7 604 aa20.91■□□□□ 0.94
CIRBP-220ENST00000588917 CLASP2O75122 1294 aaKnown RBP20.91■□□□□ 0.94
CIRBP-220ENST00000588917 WEE2P0C1S8 567 aa20.91■□□□□ 0.94
CIRBP-220ENST00000588917 RPL17P18621 184 aaKnown RBP20.91■□□□□ 0.94
CIRBP-220ENST00000588917 PON1P27169 355 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms