RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 CYP4A22Q5TCH4 519 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 CENPPQ6IPU0 288 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 PDZD4Q76G19 769 aaPredicted RBP17.9■□□□□ 0.46
SREBF1-219ENST00000580540 BMP8AQ7Z5Y6 402 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 HS6ST3Q8IZP7 471 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 SLC44A3Q8N4M1 653 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 FBXL6Q8N531 539 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 LRRC52Q8N7C0 313 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 GOLGA5Q8TBA6 731 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 CCDC34Q96HJ3 373 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 CRISPLD1Q9H336 500 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 CEP72Q9P209 647 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 YIPF1Q9Y548 306 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 NUMBLQ9Y6R0 609 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 SOAT2O75908 522 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 EPHB3P54753 998 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 DPYDQ12882 1025 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 MYO1EQ12965 1108 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 PLD1Q13393 1074 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 HTR4Q13639 388 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 PARM1Q6UWI2 310 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 WDR49Q8IV35 697 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 NPAS3Q8IXF0 933 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 PDCL2Q8N4E4 241 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 FAM200AQ8TCP9 573 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 NXPE3Q969Y0 559 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 TCEAL4Q96EI5 215 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 HPDLQ96IR7 371 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 SEPT5Q99719 369 aaPredicted RBP17.89■□□□□ 0.45
SREBF1-219ENST00000580540 RTP3Q9BQQ7 232 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 ZCWPW1Q9H0M4 648 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 MFSD1Q9H3U5 465 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 DUSP12Q9UNI6 340 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 MAPK8IP1Q9UQF2 711 aa17.89■□□□□ 0.45
SREBF1-219ENST00000580540 ZNF197O14709 1029 aa17.88■□□□□ 0.45
SREBF1-219ENST00000580540 CLSTN1O94985 981 aa17.88■□□□□ 0.45
SREBF1-219ENST00000580540 CFHP08603 1231 aa17.88■□□□□ 0.45
SREBF1-219ENST00000580540 CEBPBP17676 345 aa17.88■□□□□ 0.45
SREBF1-219ENST00000580540 TSPY1Q01534 308 aa17.88■□□□□ 0.45
SREBF1-219ENST00000580540 PSMD6Q15008 389 aa17.88■□□□□ 0.45
SREBF1-219ENST00000580540 MGAT5BQ3V5L5 792 aa17.88■□□□□ 0.45
SREBF1-219ENST00000580540 TRAPPC11Q7Z392 1133 aa17.88■□□□□ 0.45
SREBF1-219ENST00000580540 C12orf56Q8IXR9 622 aa17.88■□□□□ 0.45
SREBF1-219ENST00000580540 DCP1BQ8IZD4 617 aaKnown RBP17.88■□□□□ 0.45
SREBF1-219ENST00000580540 TTC9BQ8N6N2 239 aa17.88■□□□□ 0.45
SREBF1-219ENST00000580540 CXorf38Q8TB03 319 aa17.88■□□□□ 0.45
SREBF1-219ENST00000580540 FGF14Q92915 247 aa17.88■□□□□ 0.45
SREBF1-219ENST00000580540 CGRRF1Q99675 332 aa17.88■□□□□ 0.45
SREBF1-219ENST00000580540 RPP25Q9BUL9 199 aaKnown RBP17.88■□□□□ 0.45
SREBF1-219ENST00000580540 ASAH2Q9NR71 780 aa17.88■□□□□ 0.45
SREBF1-219ENST00000580540 L1RE1Q9UN81 338 aa17.88■□□□□ 0.45
SREBF1-219ENST00000580540 NOTCH4Q99466 2003 aa17.88■□□□□ 0.45
SREBF1-219ENST00000580540 ANHXE9PGG2 379 aa17.87■□□□□ 0.45
SREBF1-219ENST00000580540 PRPF40AO75400 957 aaKnown RBP17.87■□□□□ 0.45
SREBF1-219ENST00000580540 KIF20AO95235 890 aa17.87■□□□□ 0.45
SREBF1-219ENST00000580540 GJA1P17302 382 aa17.87■□□□□ 0.45
SREBF1-219ENST00000580540 ACAT1P24752 427 aaKnown RBP17.87■□□□□ 0.45
SREBF1-219ENST00000580540 CASP4P49662 377 aa17.87■□□□□ 0.45
SREBF1-219ENST00000580540 MYL7Q01449 175 aa17.87■□□□□ 0.45
SREBF1-219ENST00000580540 MTSS1LQ765P7 747 aa17.87■□□□□ 0.45
SREBF1-219ENST00000580540 LRRTM3Q86VH5 581 aa17.87■□□□□ 0.45
SREBF1-219ENST00000580540 KXD1Q9BQD3 176 aa17.87■□□□□ 0.45
SREBF1-219ENST00000580540 DDX43Q9NXZ2 648 aaKnown RBP17.87■□□□□ 0.45
SREBF1-219ENST00000580540 ABI2Q9NYB9 513 aaPredicted RBP17.87■□□□□ 0.45
SREBF1-219ENST00000580540 STK25O00506 426 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 PDXKO00764 312 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 CALUO43852 315 aaPredicted RBP17.86■□□□□ 0.45
SREBF1-219ENST00000580540 PHACTR2O75167 634 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 RHOBTB3O94955 611 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 NR3C1P04150 777 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 CCR2P41597 374 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 TUFMP49411 452 aaKnown RBP17.86■□□□□ 0.45
SREBF1-219ENST00000580540 TRPC3Q13507 836 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 PNOCQ13519 176 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 PRSS36Q5K4E3 855 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 CEP135Q66GS9 1140 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 OSTM1Q86WC4 334 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 ADGRF2Q8IZF7 708 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 TMEM86AQ8N2M4 240 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 FLCNQ8NFG4 579 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 MMS19Q96T76 1030 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 KCTD10Q9H3F6 313 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 AVENQ9NQS1 362 aaPredicted RBP17.86■□□□□ 0.45
SREBF1-219ENST00000580540 GDAP2Q9NXN4 497 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 GDE1Q9NZC3 331 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 CA14Q9ULX7 337 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 TSC2P49815 1807 aa17.86■□□□□ 0.45
SREBF1-219ENST00000580540 CST3P01034 146 aaPredicted RBP17.85■□□□□ 0.45
SREBF1-219ENST00000580540 SRFP11831 508 aa17.85■□□□□ 0.45
SREBF1-219ENST00000580540 RFX1P22670 979 aa17.85■□□□□ 0.45
SREBF1-219ENST00000580540 VCPP55072 806 aaKnown RBP17.85■□□□□ 0.45
SREBF1-219ENST00000580540 BIRC3Q13489 604 aa17.85■□□□□ 0.45
SREBF1-219ENST00000580540 TAF12Q16514 161 aa17.85■□□□□ 0.45
SREBF1-219ENST00000580540 SOWAHAQ2M3V2 549 aa17.85■□□□□ 0.45
SREBF1-219ENST00000580540 DNAJB7Q7Z6W7 309 aaPredicted RBP17.85■□□□□ 0.45
SREBF1-219ENST00000580540 FMR1NBQ8N0W7 255 aaPredicted RBP17.85■□□□□ 0.45
SREBF1-219ENST00000580540 SIX5Q8N196 739 aa17.85■□□□□ 0.45
SREBF1-219ENST00000580540 TOP6BLQ8N6T0 577 aa17.85■□□□□ 0.45
SREBF1-219ENST00000580540 LEMD2Q8NC56 503 aa17.85■□□□□ 0.45
SREBF1-219ENST00000580540 GIPC2Q8TF65 315 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms