RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 TPH2Q8IWU9 490 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 STPG3Q8N7X2 389 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 CDYL2Q8N8U2 506 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 FBXO15Q8NCQ5 510 aaPredicted RBP6.5□□□□□ -1.37
SF3B3-214ENST00000572365 WDR48Q8TAF3 677 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 TTC8Q8TAM2 541 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 AIFM3Q96NN9 605 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 NOX5Q96PH1 765 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 GOLGA6AQ9NYA3 693 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 PCDHB6Q9Y5E3 794 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 CDY2AQ9Y6F7 541 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 WDR87Q6ZQQ6 2873 aa6.5□□□□□ -1.37
SF3B3-214ENST00000572365 BRWD1Q9NSI6 2320 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 TRANK1O15050 2925 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 ZDBF2Q9HCK1 2354 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 A0A0G2JLL6 359 aaPredicted RBP6.49□□□□□ -1.37
SF3B3-214ENST00000572365 PI4KAP2A4QPH2 592 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 RFXAPO00287 272 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 CXCL11O14625 94 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 CUTAO60888 179 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 FRAT2O75474 233 aaPredicted RBP6.49□□□□□ -1.37
SF3B3-214ENST00000572365 IL33O95760 270 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 KNG1P01042 644 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 HIBADHP31937 336 aaKnown RBP6.49□□□□□ -1.37
SF3B3-214ENST00000572365 TMPOP42166 694 aaKnown RBP6.49□□□□□ -1.37
SF3B3-214ENST00000572365 ADKP55263 362 aaKnown RBP6.49□□□□□ -1.37
SF3B3-214ENST00000572365 DLG4P78352 724 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 CD83Q01151 205 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 TRIM60Q495X7 471 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 KRT40Q6A162 431 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 FASTKD5Q7L8L6 764 aaKnown RBP6.49□□□□□ -1.37
SF3B3-214ENST00000572365 PRRT2Q7Z6L0 340 aaPredicted RBP6.49□□□□□ -1.37
SF3B3-214ENST00000572365 PI4KAP1Q8N8J0 262 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 OR5AN1Q8NGI8 311 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 TDRD7Q8NHU6 1098 aaKnown RBP6.49□□□□□ -1.37
SF3B3-214ENST00000572365 TIFAQ96CG3 184 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 FAM84BQ96KN1 310 aaPredicted RBP6.49□□□□□ -1.37
SF3B3-214ENST00000572365 SLC2A13Q96QE2 648 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 IFT122Q9HBG6 1241 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 CD320Q9NPF0 282 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 TMOD2Q9NZR1 351 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 FLRT1Q9NZU1 646 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 TUBD1Q9UJT1 453 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 ZNF112Q9UJU3 913 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 AFG3L2Q9Y4W6 797 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 MAST2Q6P0Q8 1798 aa6.49□□□□□ -1.37
SF3B3-214ENST00000572365 PTPRZ1P23471 2315 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-214ENST00000572365 SMIM22K7EJ46 135 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 PRC1O43663 620 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 NDUFS2O75306 463 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 CYP7B1O75881 506 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 TAL1P17542 331 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-214ENST00000572365 LPOP22079 712 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-214ENST00000572365 AKAP5P24588 427 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 LIMS1P48059 325 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 FKBP1AP62942 108 aaKnown RBP6.48□□□□□ -1.37
SF3B3-214ENST00000572365 PPARAQ07869 468 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 RRP12Q5JTH9 1297 aaKnown RBP6.48□□□□□ -1.37
SF3B3-214ENST00000572365 MAP3K21Q5TCX8 1036 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 SLC39A5Q6ZMH5 540 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 G2E3Q7L622 706 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 EPM2AIP1Q7L775 607 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-214ENST00000572365 GAB3Q8WWW8 586 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 TEKT1Q969V4 418 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 HIST1H2AHQ96KK5 128 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 ZSWIM3Q96MP5 696 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 P2RX7Q99572 595 aaKnown RBP6.48□□□□□ -1.37
SF3B3-214ENST00000572365 HIST1H2AJQ99878 128 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 NOL10Q9BSC4 688 aaKnown RBP6.48□□□□□ -1.37
SF3B3-214ENST00000572365 PUS3Q9BZE2 481 aaKnown RBP6.48□□□□□ -1.37
SF3B3-214ENST00000572365 EVLQ9UI08 416 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-214ENST00000572365 FBXO10Q9UK96 956 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 USP18Q9UMW8 372 aa6.48□□□□□ -1.37
SF3B3-214ENST00000572365 CDK5RAP2Q96SN8 1893 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 ZNFX1Q9P2E3 1918 aaKnown RBP6.47□□□□□ -1.37
SF3B3-214ENST00000572365 MYH13Q9UKX3 1938 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 ANKRD18BA2A2Z9 1011 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 SEC24DO94855 1032 aaPredicted RBP6.47□□□□□ -1.37
SF3B3-214ENST00000572365 ZKSCAN1P17029 563 aaPredicted RBP6.47□□□□□ -1.37
SF3B3-214ENST00000572365 GNALP38405 381 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 HMGCS2P54868 508 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 TLE2Q04725 743 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 SPP2Q13103 211 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 DGKDQ16760 1214 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 GFOD2Q3B7J2 385 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 WDR72Q3MJ13 1102 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 PRR31Q5SQ13 230 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 PRAMEF19Q5SWL8 479 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 TMEM200BQ69YZ2 307 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 GRAMD4Q6IC98 578 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 CDC42EP5Q6NZY7 148 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 FAM83AQ86UY5 434 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 TMEFF1Q8IYR6 380 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 BCL6BQ8N143 479 aaPredicted RBP6.47□□□□□ -1.37
SF3B3-214ENST00000572365 C8orf58Q8NAV2 365 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 TRPV1Q8NER1 839 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 PPP1R14CQ8TAE6 165 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 ZBTB8AQ96BR9 441 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 SIGLEC10Q96LC7 697 aa6.47□□□□□ -1.37
SF3B3-214ENST00000572365 KRTAP4-12Q9BQ66 201 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms