RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 NDUFAB1O14561 156 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 AP3D1O14617 1153 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 TRDMT1O14717 391 aaKnown RBP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 TPP1O14773 563 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 THAP12O43422 761 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 KCNJ13O60928 360 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 EFCAB14O75071 495 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 ZC3H11AO75152 810 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 LEFTY1O75610 366 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 CRTAPO75718 401 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 KLHL18O94889 574 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 TBX18O95935 607 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 F13A1P00488 732 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 CELA3AP09093 270 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 ENO2P09104 434 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 QDPRP09417 244 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 MYBP10242 640 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 PYGMP11217 842 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 RAG1P15918 1043 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 KELP23276 732 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 NFKBIAP25963 317 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 CFPP27918 469 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 RPL9P32969 192 aaKnown RBP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 VPS41P49754 854 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 ZNF165P49910 485 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 ZNF157P51786 506 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 AP3M2P53677 418 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 SSTP61278 116 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 B2MP61769 119 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 RPP38P78345 283 aaKnown RBP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 HTD2P86397 168 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 ACY1Q03154 408 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 KRT17Q04695 432 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 ZNF252P-AS1Q0IIN9 211 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 FOXO1Q12778 655 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 CETN1Q12798 172 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 CUL2Q13617 745 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 ZNF460Q14592 562 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 CRYMQ14894 314 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 ZRSR1Q15695 479 aaKnown RBP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 SNCBQ16143 134 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 RNASEH2BQ5TBB1 312 aaKnown RBP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 ADALQ6DHV7 355 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 PM20D1Q6GTS8 502 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 THOC7Q6I9Y2 204 aaKnown RBP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 OR7E24Q6IFN5 339 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 CENPPQ6IPU0 288 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 MTHFD1LQ6UB35 978 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 TTLL7Q6ZT98 887 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 SYDE1Q6ZW31 735 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 ZNF804AQ7Z570 1209 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 PRPF39Q86UA1 669 aaKnown RBP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 COMTD1Q86VU5 262 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 C12orf56Q8IXR9 622 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 CMTR2Q8IYT2 770 aaKnown RBP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 PRR18Q8N4B5 295 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 RNF10Q8N5U6 811 aaKnown RBP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 TOP6BLQ8N6T0 577 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 DNAAF3Q8N9W5 541 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 MFSD2AQ8NA29 543 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 ZBTB44Q8NCP5 570 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 GMCL1P1Q8NEA9 526 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 OR56B2PQ8NGI1 322 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 SLC35G2Q8TBE7 412 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 ETNPPLQ8TBG4 499 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 UCMAQ8WVF2 138 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 CCDC74BQ96LY2 380 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 C7orf26Q96N11 449 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 PSKH2Q96QS6 385 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 TBCBQ99426 244 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 STK31Q9BXU1 1019 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 SIL1Q9H173 461 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 SMOC1Q9H4F8 434 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 TASP1Q9H6P5 420 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 LIN28AQ9H9Z2 209 aaKnown RBP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 IFT80Q9P2H3 777 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 VPS28Q9UK41 221 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 APOBEC2Q9Y235 224 aaKnown RBP4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 SPO11Q9Y5K1 396 aa4.82□□□□□ -1.64
HMGB3P26-201ENST00000560051 A0A1B0GUA9 196 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 CTAGE15A4D2H0 777 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 KRT87PA6NCN2 255 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 PGPEP1LA6NFU8 196 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 F8W031 263 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 K7ESF4 209 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 APOL1O14791 398 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 MAGEB3O15480 346 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 PQBP1O60828 265 aaKnown RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 ERLIN2O94905 339 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 FSBPO95073 299 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 PGM3O95394 542 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 POP4O95707 220 aaKnown RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 GSTP1P09211 210 aaKnown RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 POLR2MP0CAP2 368 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 CTAGE8P0CG41 777 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 TROVE2P10155 538 aaKnown RBP eCLIP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 PRKAR1AP10644 381 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 HSPA8P11142 646 aaKnown RBP4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 IL11P20809 199 aa4.81□□□□□ -1.64
HMGB3P26-201ENST00000560051 RPL13P26373 211 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms