RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 SLC16A3O15427 465 aaKnown RBP17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 ABLIM3O94929 683 aa17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 VNN1O95497 513 aa17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 C1RP00736 705 aa17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 C4BPAP04003 597 aaKnown RBP17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 TNNC1P63316 161 aa17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 ZP2Q05996 745 aa17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 NCOA4Q13772 614 aa17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 ZNF699Q32M78 642 aa17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 WDR72Q3MJ13 1102 aa17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 SLC39A12Q504Y0 691 aa17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 C1orf220Q5T0J3 134 aa17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 CCDC149Q6ZUS6 474 aa17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 ADHFE1Q8IWW8 467 aa17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 ZNF707Q96C28 371 aaPredicted RBP17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 RTP3Q9BQQ7 232 aa17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 MKNK1Q9BUB5 465 aa17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 OXCT2Q9BYC2 517 aaPredicted RBP17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 ZDHHC7Q9NXF8 308 aa17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 DDX43Q9NXZ2 648 aaKnown RBP17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 NXF1Q9UBU9 619 aaKnown RBP17.02■□□□□ 0.32
RABGGTA-206ENST00000558649 HCRTO43612 131 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 SEC24AO95486 1093 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 LRG1P02750 347 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 ATF2P15336 505 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 ACAT1P24752 427 aaKnown RBP17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 PPP3CAQ08209 521 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 SOWAHAQ2M3V2 549 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 CCDC40Q4G0X9 1142 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 TPGS2Q68CL5 300 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 TTI2Q6NXR4 508 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 SCARA5Q6ZMJ2 495 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 C15orf39Q6ZRI6 1047 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 SV2AQ7L0J3 742 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 OSTM1Q86WC4 334 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 TMEM86AQ8N2M4 240 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 TOP6BLQ8N6T0 577 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 CMASQ8NFW8 434 aaPredicted RBP17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 SYAP1Q96A49 352 aaPredicted RBP17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 NECTIN4Q96NY8 510 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 DUSP9Q99956 384 aaKnown RBP17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 PHF7Q9BWX1 381 aaPredicted RBP17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 PRKD2Q9BZL6 878 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 PRKAG3Q9UGI9 489 aa17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 AFF4Q9UHB7 1163 aaKnown RBP17.01■□□□□ 0.31
RABGGTA-206ENST00000558649 DLL1O00548 723 aa17■□□□□ 0.31
RABGGTA-206ENST00000558649 IKBKBO14920 756 aa17■□□□□ 0.31
RABGGTA-206ENST00000558649 XYLBO75191 536 aa17■□□□□ 0.31
RABGGTA-206ENST00000558649 HLA-DRAP01903 254 aa17■□□□□ 0.31
RABGGTA-206ENST00000558649 HNRNPA1P09651 372 aaKnown RBP eCLIP17■□□□□ 0.31
RABGGTA-206ENST00000558649 ATICP31939 592 aa17■□□□□ 0.31
RABGGTA-206ENST00000558649 MYL7Q01449 175 aa17■□□□□ 0.31
RABGGTA-206ENST00000558649 TSPY1Q01534 308 aa17■□□□□ 0.31
RABGGTA-206ENST00000558649 GPR17Q13304 367 aa17■□□□□ 0.31
RABGGTA-206ENST00000558649 ZACNQ401N2 412 aa17■□□□□ 0.31
RABGGTA-206ENST00000558649 ZC3H3Q8IXZ2 948 aaKnown RBP17■□□□□ 0.31
RABGGTA-206ENST00000558649 ZCWPW1Q9H0M4 648 aa17■□□□□ 0.31
RABGGTA-206ENST00000558649 XYLT2Q9H1B5 865 aa17■□□□□ 0.31
RABGGTA-206ENST00000558649 ARMCX3Q9UH62 379 aaPredicted RBP17■□□□□ 0.31
RABGGTA-206ENST00000558649 INSL5Q9Y5Q6 135 aa17■□□□□ 0.31
RABGGTA-206ENST00000558649 CLUHO75153 1309 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 MTMR11A4FU01 709 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 VNN2O95498 520 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 MBD3O95983 291 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 RAP1GAPP47736 663 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 DUSP4Q13115 394 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 UVSSAQ2YD98 709 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 DPCR1Q3MIW9 517 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 ZNF667Q5HYK9 610 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 SPOPLQ6IQ16 392 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 GRASPQ7Z6J2 395 aaPredicted RBP16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 TCEAL8Q8IYN2 117 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 TTC9BQ8N6N2 239 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 ATAD1Q8NBU5 361 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 KBTBD7Q8WVZ9 684 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 CEP63Q96MT8 703 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 MRPL45Q9BRJ2 306 aaKnown RBP16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 PI4K2AQ9BTU6 479 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 SNX25Q9H3E2 840 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 CD320Q9NPF0 282 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 HCFC1R1Q9NWW0 138 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 ABI2Q9NYB9 513 aaPredicted RBP16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 SLC27A5Q9Y2P5 690 aa16.99■□□□□ 0.31
RABGGTA-206ENST00000558649 C5orf42Q9H799 3197 aa16.98■□□□□ 0.31
RABGGTA-206ENST00000558649 STX10O60499 249 aa16.98■□□□□ 0.31
RABGGTA-206ENST00000558649 SOAT2O75908 522 aa16.98■□□□□ 0.31
RABGGTA-206ENST00000558649 HOXA9P31269 272 aa16.98■□□□□ 0.31
RABGGTA-206ENST00000558649 LHX1P48742 406 aa16.98■□□□□ 0.31
RABGGTA-206ENST00000558649 MXI1P50539 228 aa16.98■□□□□ 0.31
RABGGTA-206ENST00000558649 PSMC1P62191 440 aaKnown RBP16.98■□□□□ 0.31
RABGGTA-206ENST00000558649 NTHL1P78549 312 aa16.98■□□□□ 0.31
RABGGTA-206ENST00000558649 TWF1Q12792 350 aa16.98■□□□□ 0.31
RABGGTA-206ENST00000558649 CCDC142Q17RM4 750 aa16.98■□□□□ 0.31
RABGGTA-206ENST00000558649 GET4Q7L5D6 327 aaPredicted RBP16.98■□□□□ 0.31
RABGGTA-206ENST00000558649 LRRTM3Q86VH5 581 aa16.98■□□□□ 0.31
RABGGTA-206ENST00000558649 DCP1BQ8IZD4 617 aaKnown RBP16.98■□□□□ 0.31
RABGGTA-206ENST00000558649 GJD3Q8N144 294 aa16.98■□□□□ 0.31
RABGGTA-206ENST00000558649 MLKLQ8NB16 471 aa16.98■□□□□ 0.31
RABGGTA-206ENST00000558649 TAS1R2Q8TE23 839 aa16.98■□□□□ 0.31
RABGGTA-206ENST00000558649 SEPT5Q99719 369 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms