RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 PCDHGB4Q9UN71 923 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 KPNA7A9QM74 516 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 MAPRE1Q15691 268 aaKnown RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 GJB7Q6PEY0 223 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 MAB21L3Q8N8X9 362 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 IP6K1Q92551 441 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 GTSE1Q9NYZ3 720 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 GSTM1P09488 218 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PTGS2P35354 604 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 EPB41L1Q9H4G0 881 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ZNF224Q9NZL3 707 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SUN2Q9UH99 717 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SLC13A4Q9UKG4 626 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 OGDHLQ9ULD0 1010 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 DRG1Q9Y295 367 aaKnown RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 CEP164Q9UPV0 1460 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SSU72P8A0A1W2PR75 194 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 H7C1W4 665 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SLC18A3Q16572 532 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SULT1C3Q6IMI6 304 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 CRTC3Q6UUV7 619 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PROM2Q8N271 834 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SRBD1Q8N5C6 995 aaKnown RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 TPRKBQ9Y3C4 175 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 KANSL1LA0AUZ9 987 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 RNF103O00237 685 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 FLT3P36888 993 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 FBXO11Q86XK2 927 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 CDAN1Q8IWY9 1227 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 YME1L1Q96TA2 773 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 MAP3K14Q99558 947 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 IPO11Q9UI26 975 aaKnown RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PKN3Q6P5Z2 889 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PACS1Q6VY07 963 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 BEST2Q8NFU1 509 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ZNF318Q5VUA4 2279 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 H3BMM5 538 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 TPST1O60507 370 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SHBGP04278 402 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 CYP2D6P10635 497 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SLC1A6P48664 564 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 C6orf52Q5T4I8 152 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 IDH3BO43837 385 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 TCF3P15923 654 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 C4BPBP20851 252 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 NPEPPSP55786 919 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 MTA1Q13330 715 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ZNF846Q147U1 533 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SLC27A3Q5K4L6 730 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 GADL1Q6ZQY3 521 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 IFNLR1Q8IU57 520 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 NCLNQ969V3 563 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SENP2Q9HC62 589 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SP100P23497 879 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 LRPAP1P30533 357 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 NRF1Q16656 503 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 KCNT1Q5JUK3 1230 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 GARNL3Q5VVW2 1013 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 DENND5BQ6ZUT9 1274 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 RAB43Q86YS6 212 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 BORCS5Q969J3 196 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 RMDN3Q96TC7 470 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SEPHS2Q99611 448 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 LIN28AQ9H9Z2 209 aaKnown RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 EURLQ9NYK6 297 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 MPP6Q9NZW5 540 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 FRMPD2Q68DX3 1309 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ERBINQ96RT1 1412 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PARP6Q2NL67 630 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 AKIRIN2Q53H80 203 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SATL1Q86VE3 508 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PCDH20Q8N6Y1 951 aaKnown RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PGM2Q96G03 612 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ARHGEF3Q9NR81 526 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 NADKO95544 446 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 TKTP29401 623 aaKnown RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 TMEM206Q9H813 350 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 V9GYQ6 96 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 WDR19Q8NEZ3 1342 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 IBTKQ9P2D0 1353 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-248ENST00000558190 UACAQ9BZF9 1416 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 DDAH1O94760 285 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 CCND2P30279 289 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 ARPC4P59998 168 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 SMAD1Q15797 465 aaKnown RBP3.84□□□□□ -1.79
ATXN3-248ENST00000558190 RBM43Q6ZSC3 357 aaKnown RBP3.84□□□□□ -1.79
ATXN3-248ENST00000558190 BRSK2Q8IWQ3 736 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 GPD1LQ8N335 351 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 DRAXINQ8NBI3 349 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-248ENST00000558190 C1QTNF1Q9BXJ1 281 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 MROH7Q68CQ1 1323 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 A6NHS1 94 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 BMP3P12645 472 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 RFC4P35249 363 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 FAPQ12884 760 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 TRAF3Q13114 568 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 ANO7Q6IWH7 933 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 SCFD2Q8WU76 684 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 SLC5A5Q92911 643 aa3.84□□□□□ -1.79
ATXN3-248ENST00000558190 MAGEF1Q9HAY2 307 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms