RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 EGFRP00533 1210 aa18.21■□□□□ 0.5
PTPN21-208ENST00000556564 IL1RL1Q01638 556 aa18.21■□□□□ 0.5
PTPN21-208ENST00000556564 GLE1Q53GS7 698 aaKnown RBP18.21■□□□□ 0.5
PTPN21-208ENST00000556564 ANGPTL8Q6UXH0 198 aa18.21■□□□□ 0.5
PTPN21-208ENST00000556564 BCAS4Q8TDM0 211 aa18.21■□□□□ 0.5
PTPN21-208ENST00000556564 RMDN2Q96LZ7 410 aa18.21■□□□□ 0.5
PTPN21-208ENST00000556564 DDX43Q9NXZ2 648 aaKnown RBP18.21■□□□□ 0.5
PTPN21-208ENST00000556564 MAP3K7O43318 606 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 ELNP15502 786 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 PMS2P54278 862 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 GTF2H3Q13889 308 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 CYFIP2Q96F07 1278 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 SPATA17Q96L03 361 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 SYF2O95926 243 aaKnown RBP18.2■□□□□ 0.5
PTPN21-208ENST00000556564 CKMP06732 381 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 FAM171A1Q5VUB5 890 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 SLC27A1Q6PCB7 646 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 FEZF2Q8TBJ5 459 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 SCFD1Q8WVM8 642 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 GOLGA8QA0A0J9YX86 632 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 GOLGA8OA6NCC3 632 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 C3orf70A6NLC5 250 aaPredicted RBP18.2■□□□□ 0.5
PTPN21-208ENST00000556564 GOLGA8NF8WBI6 632 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 RNF217Q8TC41 542 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 RAB3IPQ96QF0 476 aaPredicted RBP18.2■□□□□ 0.5
PTPN21-208ENST00000556564 SYNPO2Q9UMS6 1093 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 CNTNAP2Q9UHC6 1331 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 KRT38O76015 456 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 BAG2O95816 211 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 SLC11A2P49281 568 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 FOXD4Q12950 439 aaPredicted RBP18.2■□□□□ 0.5
PTPN21-208ENST00000556564 ARHGEF7Q14155 803 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 RBBP7Q16576 425 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 THEMIS2Q5TEJ8 643 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 CARNMT1Q8N4J0 409 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 BTBD6Q96KE9 485 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 PGLYRP2Q96PD5 576 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 GTSE1Q9NYZ3 720 aa18.2■□□□□ 0.5
PTPN21-208ENST00000556564 PRR23AA6NEV1 266 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 LHX1P48742 406 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 KLHL38Q2WGJ6 581 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 CCDC60Q8IWA6 550 aaPredicted RBP18.19■□□□□ 0.5
PTPN21-208ENST00000556564 ADAM2Q99965 735 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 BTBD19C9JJ37 291 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 GSTA4O15217 222 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 MCF2P10911 925 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 AKT1P31749 480 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 KIF19Q2TAC6 998 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 TRAPPC11Q7Z392 1133 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 DOLKQ9UPQ8 538 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 MSCO60682 206 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 SUN1O94901 812 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 VDRP11473 427 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 EFEMP1Q12805 493 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 SYTL3Q4VX76 610 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 FBXO47Q5MNV8 452 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 CD99L2Q8TCZ2 262 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 KBTBD4Q9NVX7 518 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 EIF3BP55884 814 aaKnown RBP18.19■□□□□ 0.5
PTPN21-208ENST00000556564 IKBKEQ14164 716 aa18.19■□□□□ 0.5
PTPN21-208ENST00000556564 COMTP21964 271 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 ACAT1P24752 427 aaKnown RBP18.18■□□□□ 0.5
PTPN21-208ENST00000556564 DEFB118Q96PH6 123 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 RASA4BC9J798 803 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 RASA4O43374 803 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 IGFBP4P22692 258 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 FLT3LGP49771 235 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 ACAD10Q6JQN1 1059 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 ZNF410Q86VK4 478 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 ENGASEQ8NFI3 743 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 THOC1Q96FV9 657 aaKnown RBP18.18■□□□□ 0.5
PTPN21-208ENST00000556564 NMRK2Q9NPI5 230 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 AMACRQ9UHK6 382 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 APRTP07741 180 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 PCK1P35558 622 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 COPS2P61201 443 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 TRIM65Q6PJ69 517 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 SRRM1Q8IYB3 904 aaKnown RBP18.18■□□□□ 0.5
PTPN21-208ENST00000556564 SNX19Q92543 992 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 VCX3BQ9H321 246 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 PPME1Q9Y570 386 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 CDY2AQ9Y6F7 541 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.18■□□□□ 0.5
PTPN21-208ENST00000556564 CFAP69A5D8W1 941 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 FOXN3O00409 490 aaPredicted RBP18.18■□□□□ 0.5
PTPN21-208ENST00000556564 RPL10AP62906 217 aaKnown RBP18.18■□□□□ 0.5
PTPN21-208ENST00000556564 ZNF177Q13360 481 aaPredicted RBP18.18■□□□□ 0.5
PTPN21-208ENST00000556564 IMPG1Q17R60 797 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 ULK4Q96C45 1275 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 CAPNS2Q96L46 248 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 RPRD1AQ96P16 312 aaPredicted RBP18.18■□□□□ 0.5
PTPN21-208ENST00000556564 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.18■□□□□ 0.5
PTPN21-208ENST00000556564 ITGA11Q9UKX5 1188 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 NCAPHQ15003 741 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 ATG16L1Q676U5 607 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 SLC13A1Q9BZW2 595 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 RSAD1Q9HA92 442 aa18.18■□□□□ 0.5
PTPN21-208ENST00000556564 LACTBL1A8MY62 500 aa18.17■□□□□ 0.5
PTPN21-208ENST00000556564 P3H1Q32P28 736 aa18.17■□□□□ 0.5
PTPN21-208ENST00000556564 CFAP61Q8NHU2 1237 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms