RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 IER2Q9BTL4 223 aa7.03□□□□□ -1.28
FOXN3-205ENST00000553904 DDX23Q9BUQ8 820 aaKnown RBP7.03□□□□□ -1.28
FOXN3-205ENST00000553904 ZCWPW1Q9H0M4 648 aa7.03□□□□□ -1.28
FOXN3-205ENST00000553904 C8orf33Q9H7E9 229 aaPredicted RBP7.03□□□□□ -1.28
FOXN3-205ENST00000553904 FAM86C1Q9NVL1 165 aa7.03□□□□□ -1.28
FOXN3-205ENST00000553904 KBTBD4Q9NVX7 518 aa7.03□□□□□ -1.28
FOXN3-205ENST00000553904 OBP2AQ9NY56 170 aa7.03□□□□□ -1.28
FOXN3-205ENST00000553904 RBAKQ9NYW8 714 aaPredicted RBP7.03□□□□□ -1.28
FOXN3-205ENST00000553904 CEP72Q9P209 647 aa7.03□□□□□ -1.28
FOXN3-205ENST00000553904 UXTQ9UBK9 157 aaPredicted RBP7.03□□□□□ -1.28
FOXN3-205ENST00000553904 FBXO4Q9UKT5 387 aa7.03□□□□□ -1.28
FOXN3-205ENST00000553904 ITGA11Q9UKX5 1188 aa7.03□□□□□ -1.28
FOXN3-205ENST00000553904 AGAP1Q9UPQ3 857 aa7.03□□□□□ -1.28
FOXN3-205ENST00000553904 YIPF1Q9Y548 306 aa7.03□□□□□ -1.28
FOXN3-205ENST00000553904 ATP6V1DQ9Y5K8 247 aa7.03□□□□□ -1.28
FOXN3-205ENST00000553904 BDP1A6H8Y1 2624 aa7.03□□□□□ -1.28
FOXN3-205ENST00000553904 PVALEFA0A1B0GWK0 134 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 FRMD3A2A2Y4 597 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 MTMR11A4FU01 709 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 CHADO15335 359 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 PRPF6O94906 941 aaKnown RBP7.02□□□□□ -1.29
FOXN3-205ENST00000553904 KIF20AO95235 890 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 LMNAP02545 664 aaKnown RBP7.02□□□□□ -1.29
FOXN3-205ENST00000553904 KRT19P08727 400 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 FAM163BP0C2L3 166 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 CSH1P0DML2 217 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 CSH2P0DML3 217 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 ZSCAN22P10073 491 aaPredicted RBP7.02□□□□□ -1.29
FOXN3-205ENST00000553904 CEBPBP17676 345 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 DDX6P26196 483 aaKnown RBP eCLIP7.02□□□□□ -1.29
FOXN3-205ENST00000553904 PCSK1P29120 753 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 WEE1P30291 646 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 GDI1P31150 447 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 GUCY2FP51841 1108 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 ASIC1P78348 528 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 PLCB2Q00722 1185 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 MAPRE1Q15691 268 aaKnown RBP7.02□□□□□ -1.29
FOXN3-205ENST00000553904 SLC5A9Q2M3M2 681 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 ZNF528Q3MIS6 628 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 SLC39A12Q504Y0 691 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 ARHGAP29Q52LW3 1261 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 WSCD1Q658N2 575 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 CNNM4Q6P4Q7 775 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 CRELD2Q6UXH1 353 aaPredicted RBP7.02□□□□□ -1.29
FOXN3-205ENST00000553904 MAMSTRQ6ZN01 415 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 BRSK2Q8IWQ3 736 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 HS6ST3Q8IZP7 471 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 FSIP1Q8NA03 581 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 ZNF507Q8TCN5 953 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 ATRIPQ8WXE1 791 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 SECISBP2LQ93073 1101 aaKnown RBP7.02□□□□□ -1.29
FOXN3-205ENST00000553904 CCDC47Q96A33 483 aaKnown RBP7.02□□□□□ -1.29
FOXN3-205ENST00000553904 DHX58Q96C10 678 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 CCDC34Q96HJ3 373 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 FNBP1Q96RU3 617 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 SEPT5Q99719 369 aaPredicted RBP7.02□□□□□ -1.29
FOXN3-205ENST00000553904 C7orf25Q9BPX7 421 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 FAM126AQ9BYI3 521 aaPredicted RBP7.02□□□□□ -1.29
FOXN3-205ENST00000553904 TRIM9Q9C026 710 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 ZNF334Q9HCZ1 680 aaPredicted RBP7.02□□□□□ -1.29
FOXN3-205ENST00000553904 LTB4R2Q9NPC1 389 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 SPATA6Q9NWH7 488 aaPredicted RBP7.02□□□□□ -1.29
FOXN3-205ENST00000553904 GDAP2Q9NXN4 497 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 EHD2Q9NZN4 543 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 USP25Q9UHP3 1055 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 SLC27A5Q9Y2P5 690 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 PCDHB5Q9Y5E4 795 aa7.02□□□□□ -1.29
FOXN3-205ENST00000553904 TECTAO75443 2155 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 A0A1W2PRU2 124 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 HEPACAM2A8MVW5 462 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 SPTLC1O15269 473 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 POLR2DO15514 142 aaKnown RBP7.01□□□□□ -1.29
FOXN3-205ENST00000553904 KINO60870 393 aaKnown RBP7.01□□□□□ -1.29
FOXN3-205ENST00000553904 F13A1P00488 732 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 ITGB3P05106 788 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 MYL1P05976 194 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 OR4Q2P0C623 313 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 SP9P0CG40 484 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 HAPLN1P10915 354 aaPredicted RBP7.01□□□□□ -1.29
FOXN3-205ENST00000553904 TNNI1P19237 187 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 TRIM21P19474 475 aaKnown RBP7.01□□□□□ -1.29
FOXN3-205ENST00000553904 GABRR2P28476 465 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 POLR2BP30876 1174 aaKnown RBP7.01□□□□□ -1.29
FOXN3-205ENST00000553904 AVPR1AP37288 418 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 PDE6CP51160 858 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 KPNA1P52294 538 aaPredicted RBP7.01□□□□□ -1.29
FOXN3-205ENST00000553904 AP3M2P53677 418 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 KCNA1Q09470 495 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 BFSP1Q12934 665 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 PSMD2Q13200 908 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 TEAD2Q15562 447 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 FAM26FQ5R3K3 315 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 GPR158Q5T848 1215 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 CC2D1AQ6P1N0 951 aaPredicted RBP7.01□□□□□ -1.29
FOXN3-205ENST00000553904 C4orf50Q6ZRC1 276 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 TPRG1Q6ZUI0 275 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 UNC13DQ70J99 1090 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 FRMD5Q7Z6J6 570 aa7.01□□□□□ -1.29
FOXN3-205ENST00000553904 SPATA2LQ8IUW3 424 aaPredicted RBP7.01□□□□□ -1.29
FOXN3-205ENST00000553904 ARID3BQ8IVW6 561 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms