RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 MARS2Q96GW9 593 aaKnown RBP6.28□□□□□ -1.4
SYNE2-210ENST00000553455 LRIG1Q96JA1 1093 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 WWC2-AS2Q96NR7 200 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 MNTQ99583 582 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 CNPPD1Q9BV87 410 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 CHST8Q9H2A9 424 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 PPCSQ9HAB8 311 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 A1CFQ9NQ94 594 aaKnown RBP6.28□□□□□ -1.4
SYNE2-210ENST00000553455 HSFX1Q9UBD0 423 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 XPR1Q9UBH6 696 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 HESX1Q9UBX0 185 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 JAG2Q9Y219 1238 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 CDYLQ9Y232 598 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 TMX2Q9Y320 296 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 A0A087WV62 115 aa6.27□□□□□ -1.41
SYNE2-210ENST00000553455 FOSP01100 380 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-210ENST00000553455 APOBEC3AP31941 199 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-210ENST00000553455 HSPA7P48741 367 aa6.27□□□□□ -1.41
SYNE2-210ENST00000553455 SCNN1GP51170 649 aa6.27□□□□□ -1.41
SYNE2-210ENST00000553455 UNC13DQ70J99 1090 aa6.27□□□□□ -1.41
SYNE2-210ENST00000553455 SGMS1Q86VZ5 419 aa6.27□□□□□ -1.41
SYNE2-210ENST00000553455 MPP5Q8N3R9 675 aa6.27□□□□□ -1.41
SYNE2-210ENST00000553455 IQCDQ96DY2 449 aa6.27□□□□□ -1.41
SYNE2-210ENST00000553455 GPR87Q9BY21 358 aa6.27□□□□□ -1.41
SYNE2-210ENST00000553455 SIK2Q9H0K1 926 aa6.27□□□□□ -1.41
SYNE2-210ENST00000553455 SERHLQ9NQF3 203 aa6.27□□□□□ -1.41
SYNE2-210ENST00000553455 LRCH1Q9Y2L9 728 aa6.27□□□□□ -1.41
SYNE2-210ENST00000553455 GRXCR1A8MXD5 290 aa6.26□□□□□ -1.41
SYNE2-210ENST00000553455 DCLK1O15075 740 aa6.26□□□□□ -1.41
SYNE2-210ENST00000553455 ZNF185O15231 689 aa6.26□□□□□ -1.41
SYNE2-210ENST00000553455 TXNP10599 105 aaKnown RBP6.26□□□□□ -1.41
SYNE2-210ENST00000553455 ACO1P21399 889 aaKnown RBP6.26□□□□□ -1.41
SYNE2-210ENST00000553455 CARSP49589 748 aaKnown RBP6.26□□□□□ -1.41
SYNE2-210ENST00000553455 MXRA7P84157 204 aa6.26□□□□□ -1.41
SYNE2-210ENST00000553455 HHEXQ03014 270 aa6.26□□□□□ -1.41
SYNE2-210ENST00000553455 TNFAIP2Q03169 654 aa6.26□□□□□ -1.41
SYNE2-210ENST00000553455 ICAM4Q14773 271 aa6.26□□□□□ -1.41
SYNE2-210ENST00000553455 ARL13BQ3SXY8 428 aa6.26□□□□□ -1.41
SYNE2-210ENST00000553455 INO80DQ53TQ3 878 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-210ENST00000553455 LCE3BQ5TA77 95 aa6.26□□□□□ -1.41
SYNE2-210ENST00000553455 ZDHHC24Q6UX98 284 aa6.26□□□□□ -1.41
SYNE2-210ENST00000553455 MYLK4Q86YV6 388 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-210ENST00000553455 OR56A1Q8NGH5 318 aa6.26□□□□□ -1.41
SYNE2-210ENST00000553455 TTLL2Q9BWV7 592 aa6.26□□□□□ -1.41
SYNE2-210ENST00000553455 STK31Q9BXU1 1019 aa6.26□□□□□ -1.41
SYNE2-210ENST00000553455 MS4A7Q9GZW8 240 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-210ENST00000553455 CD248Q9HCU0 757 aa6.26□□□□□ -1.41
SYNE2-210ENST00000553455 CTTNBP2NLQ9P2B4 639 aa6.26□□□□□ -1.41
SYNE2-210ENST00000553455 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-210ENST00000553455 CHST2Q9Y4C5 530 aa6.26□□□□□ -1.41
SYNE2-210ENST00000553455 CLCA1A8K7I4 914 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 ADAMTS3O15072 1205 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 NBNO60934 754 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 ZNF623O75123 536 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 VPS4BO75351 444 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 ITGB3P05106 788 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 EEF1GP26641 437 aaKnown RBP6.25□□□□□ -1.41
SYNE2-210ENST00000553455 VIPR2P41587 438 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 MAN2A2P49641 1150 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 MAPK10P53779 464 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 WNT3P56703 355 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 RNASE9P60153 205 aaKnown RBP6.25□□□□□ -1.41
SYNE2-210ENST00000553455 TRIM14Q14142 442 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 TSHZ3Q63HK5 1081 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 TAPT1Q6NXT6 567 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 LRRC55Q6ZSA7 311 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 GSPT2Q8IYD1 628 aaKnown RBP6.25□□□□□ -1.41
SYNE2-210ENST00000553455 FANCBQ8NB91 859 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 NSUN7Q8NE18 718 aaKnown RBP6.25□□□□□ -1.41
SYNE2-210ENST00000553455 SPSB4Q96A44 273 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 TMEM41AQ96HV5 264 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 PNKPQ96T60 521 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 GDF15Q99988 308 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 TEX101Q9BY14 249 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 TBC1D30Q9Y2I9 924 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 USP15Q9Y4E8 981 aaPredicted RBP6.25□□□□□ -1.41
SYNE2-210ENST00000553455 AATKQ6ZMQ8 1374 aa6.25□□□□□ -1.41
SYNE2-210ENST00000553455 A0A087WZ62 844 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 A0A0G2JLL6 359 aaPredicted RBP6.24□□□□□ -1.41
SYNE2-210ENST00000553455 A0A1B0GTW7 788 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 GOLGA6L6A8MZA4 724 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 MYO1CO00159 1063 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 POLRMTO00411 1230 aaKnown RBP6.24□□□□□ -1.41
SYNE2-210ENST00000553455 THAP12O43422 761 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 CREB3O43889 395 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 PLA2G6O60733 806 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 CHRM3P20309 590 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 FGFR4P22455 802 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 TECP42680 631 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 OCA2Q04671 838 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 PIGFQ07326 219 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 AMOTQ4VCS5 1084 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 C4orf46Q504U0 113 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 PDCD4Q53EL6 469 aaKnown RBP6.24□□□□□ -1.41
SYNE2-210ENST00000553455 CATSPERGQ6ZRH7 1159 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 TMPRSS9Q7Z410 1059 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 GAS2L3Q86XJ1 694 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 Q8NA96 180 aa6.24□□□□□ -1.41
SYNE2-210ENST00000553455 PSD4Q8NDX1 1056 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms