RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 MLH1P40692 756 aa20.81■□□□□ 0.92
RBFOX1-215ENST00000553186 NDST1P52848 882 aa20.81■□□□□ 0.92
RBFOX1-215ENST00000553186 RPS6KA1Q15418 735 aa20.81■□□□□ 0.92
RBFOX1-215ENST00000553186 PTPROQ16827 1216 aa20.81■□□□□ 0.92
RBFOX1-215ENST00000553186 C2CD6Q53TS8 623 aa20.81■□□□□ 0.92
RBFOX1-215ENST00000553186 HACE1Q8IYU2 909 aa20.81■□□□□ 0.92
RBFOX1-215ENST00000553186 TTC39CQ8N584 583 aa20.81■□□□□ 0.92
RBFOX1-215ENST00000553186 WDTC1Q8N5D0 677 aa20.81■□□□□ 0.92
RBFOX1-215ENST00000553186 VCPIP1Q96JH7 1222 aa20.81■□□□□ 0.92
RBFOX1-215ENST00000553186 DEFB118Q96PH6 123 aa20.81■□□□□ 0.92
RBFOX1-215ENST00000553186 GAD1Q99259 594 aa20.81■□□□□ 0.92
RBFOX1-215ENST00000553186 PDCD11Q14690 1871 aaKnown RBP20.81■□□□□ 0.92
RBFOX1-215ENST00000553186 SPTLC1O15269 473 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 ATF7P17544 494 aaPredicted RBP20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 MMP8P22894 467 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 LRPAP1P30533 357 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 ELF2Q15723 593 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 PPP1R2P3Q6NXS1 205 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 ZNF564Q8TBZ8 553 aaPredicted RBP20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 TRIM11Q96F44 468 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 HES6Q96HZ4 224 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 MRPL45Q9BRJ2 306 aaKnown RBP20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 GIT1Q9Y2X7 761 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 CTAGE15A4D2H0 777 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 CTAGE8P0CG41 777 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 CD19P15391 556 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 RAB27AP51159 221 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 C11orf63Q6NUN7 778 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 CTAGE6Q86UF2 777 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 CTAGE4Q8IX94 777 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 UBXN4Q92575 508 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 ADAM2Q99965 735 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 ZNF518BQ9C0D4 1074 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 GDAP2Q9NXN4 497 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 ADAM22Q9P0K1 906 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 OGDHLQ9ULD0 1010 aa20.8■□□□□ 0.92
RBFOX1-215ENST00000553186 ARL5CA6NH57 179 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 PNPLA4P41247 253 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 DNA2P51530 1060 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 C1QBPQ07021 282 aaKnown RBP20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 SOWAHAQ2M3V2 549 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 LLGL2Q6P1M3 1020 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 TMEM35BQ8NCS4 154 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 C1orf131Q8NDD1 294 aaKnown RBP20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 ZNF560Q96MR9 790 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 C11orf70Q9BRQ4 267 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 SEZ6LQ9BYH1 1024 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 LHX5Q9H2C1 402 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 MIOSQ9NXC5 875 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 NME7Q9Y5B8 376 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 ALG6Q9Y672 507 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 KPNA7A9QM74 516 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 MED7O43513 233 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 CKAP4Q07065 602 aaKnown RBP20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 DENND1BQ6P3S1 775 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 MMS22LQ6ZRQ5 1243 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 ZNF572Q7Z3I7 529 aaPredicted RBP20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 FAM126BQ8IXS8 530 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 GOLGA1Q92805 767 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 AMFRQ9UKV5 643 aa20.79■□□□□ 0.92
RBFOX1-215ENST00000553186 CCL5P13501 91 aa20.78■□□□□ 0.92
RBFOX1-215ENST00000553186 LIMS2Q7Z4I7 341 aa20.78■□□□□ 0.92
RBFOX1-215ENST00000553186 NT5C1AQ9BXI3 368 aa20.78■□□□□ 0.92
RBFOX1-215ENST00000553186 RNF208Q9H0X6 261 aa20.78■□□□□ 0.92
RBFOX1-215ENST00000553186 SLC38A7Q9NVC3 462 aa20.78■□□□□ 0.92
RBFOX1-215ENST00000553186 VDRP11473 427 aa20.78■□□□□ 0.92
RBFOX1-215ENST00000553186 HSPA6P17066 643 aa20.78■□□□□ 0.92
RBFOX1-215ENST00000553186 TAF6P49848 677 aa20.78■□□□□ 0.92
RBFOX1-215ENST00000553186 LILRA4P59901 499 aa20.78■□□□□ 0.92
RBFOX1-215ENST00000553186 BTBD6Q96KE9 485 aa20.78■□□□□ 0.92
RBFOX1-215ENST00000553186 HEXIM2Q96MH2 286 aaKnown RBP20.78■□□□□ 0.92
RBFOX1-215ENST00000553186 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.78■□□□□ 0.92
RBFOX1-215ENST00000553186 O00370 1275 aa20.77■□□□□ 0.92
RBFOX1-215ENST00000553186 CES2O00748 559 aa20.77■□□□□ 0.92
RBFOX1-215ENST00000553186 THP07101 528 aa20.77■□□□□ 0.92
RBFOX1-215ENST00000553186 CNGA2Q16280 664 aa20.77■□□□□ 0.92
RBFOX1-215ENST00000553186 TEX35Q5T0J7 233 aa20.77■□□□□ 0.92
RBFOX1-215ENST00000553186 PLEKHA7Q6IQ23 1121 aa20.77■□□□□ 0.92
RBFOX1-215ENST00000553186 PHLDB2Q86SQ0 1253 aa20.77■□□□□ 0.92
RBFOX1-215ENST00000553186 CAGE1Q8TC20 777 aa20.77■□□□□ 0.92
RBFOX1-215ENST00000553186 KBTBD7Q8WVZ9 684 aa20.77■□□□□ 0.92
RBFOX1-215ENST00000553186 ANKRD7Q92527 254 aa20.77■□□□□ 0.92
RBFOX1-215ENST00000553186 MS4A14Q96JA4 679 aa20.77■□□□□ 0.92
RBFOX1-215ENST00000553186 EHD2Q9NZN4 543 aa20.77■□□□□ 0.92
RBFOX1-215ENST00000553186 KCNK3O14649 394 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 MAMLD1Q13495 774 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 MESDQ14696 234 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 RTN4RL1Q86UN2 441 aaPredicted RBP20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 NOA1Q8NC60 698 aaKnown RBP20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 RPS6KC1Q96S38 1066 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 TRIM7Q9C029 511 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 TSPYL2Q9H2G4 693 aaPredicted RBP20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 SMARCAL1Q9NZC9 954 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 RNF14Q9UBS8 474 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 CYTH4Q9UIA0 394 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 KIAA1257Q9ULG3 409 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 CEP83Q9Y592 693 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 DDX3YO15523 660 aaKnown RBP20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 IGFBP6P24592 240 aaPredicted RBP20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 SCNN1GP51170 649 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms