RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 NPTX2P47972 431 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 SLC6A9P48067 706 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 PIGFQ07326 219 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 PPP3CAQ08209 521 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 MTM1Q13496 603 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 SQSTM1Q13501 440 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 TUBB3Q13509 450 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 KRT81Q14533 505 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 TCEA2Q15560 299 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 NPY5RQ15761 445 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 TBCCQ15814 346 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 ATP13A4Q4VNC1 1196 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 AARS2Q5JTZ9 985 aaKnown RBP1.24□□□□□ -2.21
COPB1-212ENST00000534771 PCID2Q5JVF3 399 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 DACT2Q5SW24 774 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 LCE1FQ5T754 118 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 ANKRD16Q6P6B7 361 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 SLC30A10Q6XR72 485 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 TMPRSS9Q7Z410 1059 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 WDR53Q7Z5U6 358 aaPredicted RBP1.24□□□□□ -2.21
COPB1-212ENST00000534771 CHSY1Q86X52 802 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 FAM9AQ8IZU1 332 aaPredicted RBP1.24□□□□□ -2.21
COPB1-212ENST00000534771 CFAP52Q8N1V2 620 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 RBMXL3Q8N7X1 1067 aaKnown RBP1.24□□□□□ -2.21
COPB1-212ENST00000534771 NRACQ8N912 160 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 PNLDC1Q8NA58 520 aaKnown RBP1.24□□□□□ -2.21
COPB1-212ENST00000534771 C8orf58Q8NAV2 365 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 C16orf52Q8NHV5 167 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 PIGOQ8TEQ8 1089 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 SSH1Q8WYL5 1049 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 HOXB13Q92826 284 aaPredicted RBP1.24□□□□□ -2.21
COPB1-212ENST00000534771 SLC5A5Q92911 643 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 LRIG1Q96JA1 1093 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 ASB2Q96Q27 587 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 CTAGE1Q96RT6 745 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 TRIB1Q96RU8 372 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 TRMOQ9BU70 441 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 ACE2Q9BYF1 805 aaPredicted RBP1.24□□□□□ -2.21
COPB1-212ENST00000534771 AMBRA1Q9C0C7 1298 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 C11orf54Q9H0W9 315 aaPredicted RBP1.24□□□□□ -2.21
COPB1-212ENST00000534771 HIPK2Q9H2X6 1198 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 MANSC1Q9H8J5 431 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 IFT122Q9HBG6 1241 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 EMC7Q9NPA0 242 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 TXLNGQ9NUQ3 528 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 DKK3Q9UBP4 350 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 PROCRQ9UNN8 238 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 CDYLQ9Y232 598 aa1.24□□□□□ -2.21
COPB1-212ENST00000534771 RUVBL1Q9Y265 456 aaKnown RBP1.24□□□□□ -2.21
COPB1-212ENST00000534771 E5RJQ4 531 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 FCHO1O14526 889 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 ZNF213O14771 459 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 ULK1O75385 1050 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 ABLIM3O94929 683 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 NXPH3O95157 252 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 RHOP08100 348 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 SLC6A4P31645 630 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 CYP2C18P33260 490 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 EEFSECP57772 596 aaKnown RBP1.23□□□□□ -2.21
COPB1-212ENST00000534771 NANOS2P60321 138 aaKnown RBP1.23□□□□□ -2.21
COPB1-212ENST00000534771 CTXN1P60606 82 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 POU6F2P78424 691 aaPredicted RBP1.23□□□□□ -2.21
COPB1-212ENST00000534771 HTRA4P83105 476 aaPredicted RBP1.23□□□□□ -2.21
COPB1-212ENST00000534771 ATP8B2P98198 1209 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 MALLQ13021 153 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 SEPT2Q15019 361 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 RBMS2Q15434 407 aaKnown RBP1.23□□□□□ -2.21
COPB1-212ENST00000534771 NFE2L2Q16236 605 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 C21orf62-AS1Q17RA5 79 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 MUM1Q2TAK8 710 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 Q4G0T1 1027 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 PABPC1LQ4VXU2 614 aaKnown RBP1.23□□□□□ -2.21
COPB1-212ENST00000534771 SHC4Q6S5L8 630 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 C9orf47Q6ZRZ4 202 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 ZNF804AQ7Z570 1209 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 PPM1KQ8N3J5 372 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 ZGPATQ8N5A5 531 aaKnown RBP1.23□□□□□ -2.21
COPB1-212ENST00000534771 AOPEPQ8N6M6 819 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 SLC17A8Q8NDX2 589 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 IL17RDQ8NFM7 739 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 PMFBP1Q8TBY8 1022 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 POC1BQ8TC44 478 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 SH3TC2Q8TF17 1288 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 FBXO41Q8TF61 875 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 TSPEARQ8WU66 669 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 ATRIPQ8WXE1 791 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 NINJ1Q92982 152 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 FKBP10Q96AY3 582 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 COQ8BQ96D53 544 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 THOC3Q96J01 351 aaKnown RBP1.23□□□□□ -2.21
COPB1-212ENST00000534771 KLHL32Q96NJ5 620 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 OSBPL9Q96SU4 736 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 ACTRT3Q9BYD9 372 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 IMPG2Q9BZV3 1241 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 FOXP1Q9H334 677 aaPredicted RBP1.23□□□□□ -2.21
COPB1-212ENST00000534771 PDGFCQ9NRA1 345 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 TOPORSQ9NS56 1045 aaPredicted RBP1.23□□□□□ -2.21
COPB1-212ENST00000534771 POT1Q9NUX5 634 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 JKAMPQ9P055 326 aa1.23□□□□□ -2.21
COPB1-212ENST00000534771 ICKQ9UPZ9 632 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms