RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 GJC1P36383 396 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 PAPOLAP51003 745 aaKnown RBP12.25□□□□□ -0.45
USP35-207ENST00000530546 EFNA5P52803 228 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 MYL6P60660 151 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 EFCAB12Q6NXP0 572 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 USP50Q70EL3 339 aaPredicted RBP12.25□□□□□ -0.45
USP35-207ENST00000530546 BRSK2Q8IWQ3 736 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 PRELID2Q8N945 189 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 UBLCP1Q8WVY7 318 aaPredicted RBP12.25□□□□□ -0.45
USP35-207ENST00000530546 ACO2Q99798 780 aaKnown RBP12.25□□□□□ -0.45
USP35-207ENST00000530546 IMPG2Q9BZV3 1241 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 PTPN22Q9Y2R2 807 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 DNAJC25-GNG10A0A024R161 153 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 MTA2O94776 668 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 LINGO3P0C6S8 592 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 BPIFB4P59827 614 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 POU5F1Q01860 360 aaKnown RBP12.25□□□□□ -0.45
USP35-207ENST00000530546 TCEAL1Q15170 157 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 THEMIS2Q5TEJ8 643 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 ZPBP2Q6X784 338 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 TMEM130Q8N3G9 435 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 XPO6Q96QU8 1125 aaKnown RBP12.25□□□□□ -0.45
USP35-207ENST00000530546 RNPEPQ9H4A4 650 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 USTQ9Y2C2 406 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 KCNJ1P48048 391 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 TTLL4Q14679 1199 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 UAP1Q16222 522 aaPredicted RBP12.24□□□□□ -0.45
USP35-207ENST00000530546 ZNF568Q3ZCX4 644 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 EEF1DP3Q658K8 133 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 CCDC62Q6P9F0 684 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 PIGWQ7Z7B1 504 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 JAMLQ86YT9 394 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 ZFAND2BQ8WV99 257 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 CD101Q93033 1021 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 FAM81BQ96LP2 452 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 IRAK4Q9NWZ3 460 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 TTC36A6NLP5 189 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 LGR5O75473 907 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 NQO1P15559 274 aaKnown RBP12.24□□□□□ -0.45
USP35-207ENST00000530546 GCLCP48506 637 aaPredicted RBP12.24□□□□□ -0.45
USP35-207ENST00000530546 ENPEPQ07075 957 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 SNAPC2Q13487 334 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 MXD4Q14582 209 aaPredicted RBP12.24□□□□□ -0.45
USP35-207ENST00000530546 MROH7Q68CQ1 1323 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 TTC27Q6P3X3 843 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 ARMCX2Q7L311 632 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 TBC1D1Q86TI0 1168 aaPredicted RBP12.24□□□□□ -0.45
USP35-207ENST00000530546 ZNF317Q96PQ6 595 aaPredicted RBP12.24□□□□□ -0.45
USP35-207ENST00000530546 TSC22D3Q99576 134 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 CCDC113Q9H0I3 377 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 RAB17Q9H0T7 212 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 SMARCAD1Q9H4L7 1026 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 MROH8Q9H579 483 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 PAPOLBQ9NRJ5 636 aaKnown RBP12.24□□□□□ -0.45
USP35-207ENST00000530546 ADAM22Q9P0K1 906 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 NOVA2Q9UNW9 492 aaKnown RBP12.24□□□□□ -0.45
USP35-207ENST00000530546 PCDHA3Q9Y5H8 950 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 PAPPA2Q9BXP8 1791 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 OGTO15294 1046 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 PHF2O75151 1096 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 WEE2P0C1S8 567 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 PLTPP55058 493 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 DHX9Q08211 1270 aaKnown RBP12.24□□□□□ -0.45
USP35-207ENST00000530546 TRPC3Q13507 836 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 SNX1Q13596 522 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 PLPPR4Q7Z2D5 763 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 TRPM8Q7Z2W7 1104 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 SLC13A5Q86YT5 568 aaPredicted RBP12.24□□□□□ -0.45
USP35-207ENST00000530546 MINDY3Q9H8M7 445 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 FAM114A2Q9NRY5 505 aa12.24□□□□□ -0.45
USP35-207ENST00000530546 MCM3APO60318 1980 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 KRT19P08727 400 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 POTEJP0CG39 1038 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 RARAP10276 462 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 MAGOHP61326 146 aaKnown RBP12.23□□□□□ -0.45
USP35-207ENST00000530546 SPDYCQ5MJ68 293 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 ATF7IP2Q5U623 682 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 MAP1SQ66K74 1059 aaPredicted RBP12.23□□□□□ -0.45
USP35-207ENST00000530546 CCDC137Q6PK04 289 aaKnown RBP12.23□□□□□ -0.45
USP35-207ENST00000530546 TMEM192Q8IY95 271 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 CCDC105Q8IYK2 499 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 ABRAQ8N0Z2 381 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 C1orf54Q8WWF1 131 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 ERP44Q9BS26 406 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 SAMD15Q9P1V8 674 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 NXF1Q9UBU9 619 aaKnown RBP12.23□□□□□ -0.45
USP35-207ENST00000530546 ATP8A1Q9Y2Q0 1164 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 A0A0G2JMZ2 1700 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 O00370 1275 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 TMEM191BP0C7N4 346 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 TBXAS1P24557 533 aaPredicted RBP12.23□□□□□ -0.45
USP35-207ENST00000530546 EIF3BP55884 814 aaKnown RBP12.23□□□□□ -0.45
USP35-207ENST00000530546 DUOXA2Q1HG44 320 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 ZNF677Q86XU0 584 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 GBP7Q8N8V2 638 aaPredicted RBP12.23□□□□□ -0.45
USP35-207ENST00000530546 MORC4Q8TE76 937 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 TLCD1Q96CP7 247 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 MTUS1Q9ULD2 1270 aa12.23□□□□□ -0.45
USP35-207ENST00000530546 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.23□□□□□ -0.45
USP35-207ENST00000530546 LOC285556D6RIA3 1793 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms