RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 BORCS6Q96GS4 357 aa12.71□□□□□ -0.37
CTNNA1-237ENST00000523275 PYM1Q9BRP8 204 aaKnown RBP12.71□□□□□ -0.37
CTNNA1-237ENST00000523275 ZCWPW1Q9H0M4 648 aa12.71□□□□□ -0.37
CTNNA1-237ENST00000523275 ZSCAN16Q9H4T2 348 aaPredicted RBP12.71□□□□□ -0.37
CTNNA1-237ENST00000523275 MTMR6Q9Y217 621 aa12.71□□□□□ -0.37
CTNNA1-237ENST00000523275 PCDHB13Q9Y5F0 798 aa12.71□□□□□ -0.37
CTNNA1-237ENST00000523275 MORC2Q9Y6X9 1032 aaPredicted RBP12.71□□□□□ -0.37
CTNNA1-237ENST00000523275 COL4A3Q01955 1670 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 F5P12259 2224 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 KPNA7A9QM74 516 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 SOAT2O75908 522 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 GCNT3O95395 438 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 IDEP14735 1019 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 STAT6P42226 847 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 ALCAMQ13740 583 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 SLC39A12Q504Y0 691 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 WSCD1Q658N2 575 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 GAREM2Q75VX8 874 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 ARID3BQ8IVW6 561 aaPredicted RBP12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 YAF2Q8IY57 180 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 EFCAB13Q8IY85 973 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 SYCP3Q8IZU3 236 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 ZNF687Q8N1G0 1237 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 TTC9BQ8N6N2 239 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 FAM200AQ8TCP9 573 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 ATRIPQ8WXE1 791 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 USP28Q96RU2 1077 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 FAM213AQ9BRX8 229 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 ATXN3LQ9H3M9 355 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 OLFML3Q9NRN5 406 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 NDRG2Q9UN36 371 aaKnown RBP12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 PIAS3Q9Y6X2 628 aa12.7□□□□□ -0.38
CTNNA1-237ENST00000523275 CFAP54Q96N23 3096 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 TULP1O00294 542 aaPredicted RBP12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 KINO60870 393 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 LDHAP00338 332 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 GABRR2P28476 465 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 PNPLA4P41247 253 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 MLLT6P55198 1093 aaPredicted RBP12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 TFAMQ00059 246 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 SMARCB1Q12824 385 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 MTAPQ13126 283 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 VEPH1Q14D04 833 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 SV2CQ496J9 727 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 ARHGAP15Q53QZ3 475 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 STXBP5Q5T5C0 1151 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 LRRTM3Q86VH5 581 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 GPIHBP1Q8IV16 184 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 SUMF1Q8NBK3 374 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 C2orf15Q8WU43 125 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 CACTINQ8WUQ7 758 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 FAM3CQ92520 227 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 RUBCNQ92622 972 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 RSPRY1Q96DX4 576 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 SEPT5Q99719 369 aaPredicted RBP12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 PANK4Q9NVE7 773 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 PCDHGA2Q9Y5H1 932 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 ZNF292O60281 2723 aa12.69□□□□□ -0.38
CTNNA1-237ENST00000523275 DMDP11532 3685 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 A0A087X0B3 334 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 FRMD3A2A2Y4 597 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 ARNTLO00327 626 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 DPYSL4O14531 572 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 CHADO15335 359 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 STX6O43752 255 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 GARTP22102 1010 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 NASPP49321 788 aaPredicted RBP12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 CDR1P51861 262 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 CASP5P51878 434 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 FCHO2Q0JRZ9 810 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 STK38Q15208 465 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 TAF12Q16514 161 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 MGAT5BQ3V5L5 792 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 GPR158Q5T848 1215 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 MAMSTRQ6ZN01 415 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 BRSK2Q8IWQ3 736 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 DCP1BQ8IZD4 617 aaKnown RBP12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 PDILTQ8N807 584 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 ZSWIM2Q8NEG5 633 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 SPPL2BQ8TCT7 592 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 CSGALNACT1Q8TDX6 532 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 SAAL1Q96ER3 474 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 ZNF560Q96MR9 790 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 MKNK1Q9BUB5 465 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 BACH2Q9BYV9 841 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 CHRDQ9H2X0 955 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 LMAN1LQ9HAT1 526 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 ZSCAN32Q9NX65 697 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 AGAP1Q9UPQ3 857 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 WDR87Q6ZQQ6 2873 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 MIA3Q5JRA6 1907 aa12.68□□□□□ -0.38
CTNNA1-237ENST00000523275 NCANO14594 1321 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 GOLGA8IPA6NC78 632 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 GOLGA8JA6NMD2 632 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 K7ELQ4 463 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 EXTL3O43909 919 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 HAPLN1P10915 354 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 ATF6P18850 670 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 CCNE1P24864 410 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 WEE1P30291 646 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 610 ms