RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 FTH1P19P0C7X4 201 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 ALDH1A3P47895 512 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 ATXN3P54252 364 aaPredicted RBP15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 TRIP6Q15654 476 aaKnown RBP15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 NPY5RQ15761 445 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 PEAR1Q5VY43 1037 aaPredicted RBP15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 ALKAL1Q6UXT8 129 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 ARMCX6Q7L4S7 300 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 LPCAT2Q7L5N7 544 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 MAEAQ7L5Y9 396 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 LURAP1LQ8IV03 231 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 PNPLA1Q8N8W4 532 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 MDGA1Q8NFP4 955 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 OLIG1Q8TAK6 271 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 ZMAT2Q96NC0 199 aaKnown RBP15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 FNBP1Q96RU3 617 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 GTPBP2Q9BX10 602 aaKnown RBP15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 SLC46A2Q9BY10 475 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 C2orf40Q9H1Z8 148 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 SLC38A7Q9NVC3 462 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 SPTA1P02549 2419 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 ATXN2Q99700 1313 aaKnown RBP15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 IFNAR1P17181 557 aa15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 RPL9P32969 192 aaKnown RBP15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 GJA4P35212 333 aa15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 RNF20Q5VTR2 975 aa15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 CENPPQ6IPU0 288 aa15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 ZNF605Q86T29 641 aa15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 TMEFF1Q8IYR6 380 aa15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 BSNDQ8WZ55 320 aa15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 CCDC43Q96MW1 224 aaKnown RBP15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 TBC1D32Q96NH3 1257 aa15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 CAMK1GQ96NX5 476 aa15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 HSD17B14Q9BPX1 270 aa15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 EIF2AK1Q9BQI3 630 aaKnown RBP15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 IL21Q9HBE4 155 aa15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 PILRBQ9UKJ0 227 aa15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 CCL26Q9Y258 94 aa15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 SLC27A5Q9Y2P5 690 aa15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 PTPRBP23467 1997 aa15.18■□□□□ 0.02
NKX3-1-202ENST00000523261 A0A087WV48 116 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 A0A087WWV3 80 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 MARCH6O60337 910 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 CFIP05156 583 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 GCFC2P16383 781 aaKnown RBP15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 LIG1P18858 919 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 MCM4P33991 863 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 HOXD12P35452 270 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 P2RY2P41231 377 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 DPP6P42658 865 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 PSMD2Q13200 908 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 GPR17Q13304 367 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 KRT25Q7Z3Z0 450 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 RASEFQ8IZ41 740 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 CMTM8Q8IZV2 173 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 MINDY1Q8N5J2 469 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 TTC9BQ8N6N2 239 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 CEP120Q8N960 986 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 RIN3Q8TB24 985 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 PIGOQ8TEQ8 1089 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 RLN3Q8WXF3 142 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 CD101Q93033 1021 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 EXOC4Q96A65 974 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 ESYT1Q9BSJ8 1104 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 CAPN10Q9HC96 672 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 ANO2Q9NQ90 1003 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 DAXXQ9UER7 740 aaPredicted RBP15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 PCDHB8Q9UN66 801 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 SLC6A14Q9UN76 642 aa15.17■□□□□ 0.02
NKX3-1-202ENST00000523261 ATXN7O15265 892 aaPredicted RBP15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 SH3BP5O60239 455 aa15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 SOAT2O75908 522 aa15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 OAZ2O95190 189 aa15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 KCNE1P15382 129 aa15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 ITPKAP23677 461 aa15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 GFPT1Q06210 699 aaPredicted RBP15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 NT5DC1Q5TFE4 455 aa15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 ATF7IP2Q5U623 682 aa15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 LYSMD4Q5XG99 296 aa15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 ITIH5Q86UX2 942 aa15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 POTEDQ86YR6 584 aa15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 SCUBE3Q8IX30 993 aa15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 FRMD1Q8N878 549 aa15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 MCPH1Q8NEM0 835 aa15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 OR2I1PQ8NGU4 316 aa15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 USP33Q8TEY7 942 aa15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 USP13Q92995 863 aaPredicted RBP15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 C18orf25Q96B23 403 aaPredicted RBP15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 TOPORSQ9NS56 1045 aaPredicted RBP15.16■□□□□ 0.02
NKX3-1-202ENST00000523261 PLXND1Q9Y4D7 1925 aa15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 MTMR11A4FU01 709 aa15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 MAP3K13O43283 966 aa15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 SERPINF2P08697 491 aa15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 MARCKSP29966 332 aaPredicted RBP15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 CDC25CP30307 473 aa15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 GRM5P41594 1212 aa15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 YARSP54577 528 aaKnown RBP15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 YWHAHQ04917 246 aaPredicted RBP15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 PDGFRLQ15198 375 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms