RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ALDH2P05091 517 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 ALADP13716 330 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 SERPINB3P29508 390 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 AFMP43652 599 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 TRAPPC10P48553 1259 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 PRR5P85299 388 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 FGL2Q14314 439 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 CRY2Q49AN0 593 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 UNQ6494/PRO21346Q6UXR6 183 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 TMC6Q7Z403 805 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 OR2C3Q8N628 320 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 C3orf20Q8ND61 904 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 VPS37AQ8NEZ2 397 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 GPR156Q8NFN8 814 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 ABHD4Q8TB40 342 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 CPA5Q8WXQ8 436 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 ALG3Q92685 438 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 PHKBQ93100 1093 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 OSBPL6Q9BZF3 934 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 BHMT2Q9H2M3 363 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 DCP1AQ9NPI6 582 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 STARD7Q9NQZ5 370 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 SCOCQ9UIL1 159 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 YBX2Q9Y2T7 364 aaKnown RBP5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 ATP6V0A2Q9Y487 856 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 PAXBP1Q9Y5B6 917 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 ZFYVE26Q68DK2 2539 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 ABCC12Q96J65 1359 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 GCN1Q92616 2671 aaKnown RBP5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 ISM1B1AKI9 464 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 ECE2O60344 883 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 SEC24DO94855 1032 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 CHGBP05060 677 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 FTH1P19P0C7X4 201 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 MYF5P13349 255 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 EDNRBP24530 442 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 MC4RP32245 332 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 IL6STP40189 918 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 HALP42357 657 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 SESN2P58004 480 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 CDC42EP1Q00587 391 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 PFKPQ01813 784 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 BIRC3Q13489 604 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 RAB39AQ14964 217 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 STILQ15468 1287 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 PRSS36Q5K4E3 855 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 XRRA1Q6P2D8 792 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 CCDC129Q6ZRS4 1044 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 ANKS1AQ92625 1134 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 APIPQ96GX9 242 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 SUCLG2Q96I99 432 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 CRAMP1Q96RY5 1269 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 UNKQ9C0B0 810 aaKnown RBP5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 PRDM16Q9HAZ2 1276 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 KIAA1586Q9HCI6 787 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 CASS4Q9NQ75 786 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 PAK6Q9NQU5 681 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 TDP1Q9NUW8 608 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 CALCOCO1Q9P1Z2 691 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 ARHGAP20Q9P2F6 1191 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 ZNF69Q9UC07 566 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 CCDC39Q9UFE4 941 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 EVLQ9UI08 416 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 CPA4Q9UI42 421 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 GTF2A1LQ9UNN4 478 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 PCDHGB6Q9Y5F9 930 aa5.57□□□□□ -1.52
HMGB1P23-201ENST00000518743 MGAMO43451 1857 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 OR14I1A6ND48 311 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 NUDT19A8MXV4 375 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 MYBP10242 640 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 CD53P19397 219 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 CTGFP29279 349 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 CD96P40200 585 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 HK3P52790 923 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 CCT2P78371 535 aaKnown RBP5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 TNFAIP2Q03169 654 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 KIR3DS1Q14943 382 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 PLCL1Q15111 1095 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 LRRC26Q2I0M4 334 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 ALFQ53S48 1182 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 ZMYM1Q5SVZ6 1142 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 XP32Q5T750 250 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 IZUMO3Q5VZ72 239 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 CCDC70Q6NSX1 233 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 RPTNQ6XPR3 784 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 SPRED2Q7Z698 418 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 DTX1Q86Y01 620 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 TTC5Q8N0Z6 440 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 Q8N3U1 123 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 PRSS33Q8NF86 280 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 OR5AN1Q8NGI8 311 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 NSUN6Q8TEA1 469 aaKnown RBP5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 BRI3BPQ8WY22 251 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 CCT6BQ92526 530 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 ATOH1Q92858 354 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 OPTNQ96CV9 577 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 DYDC2Q96IM9 177 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 TBCBQ99426 244 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms